RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CEP63Q96MT8 703 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 TINF2Q9BSI4 451 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 NIFKQ9BYG3 293 aaKnown RBP15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 LOC102724159A0A0B4J2E5 919 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 TMEM88BA6NKF7 163 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 AOC2O75106 756 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 SMPD1P17405 629 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 PWP2Q15269 919 aaKnown RBP15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 SYCP1Q15431 976 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 HAUS6Q7Z4H7 955 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 TRIM59Q8IWR1 403 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 TMEM161BQ8NDZ6 487 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 TRAPPC12Q8WVT3 735 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 USP6NLQ92738 828 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 DRC1Q96MC2 740 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 POLR3FQ9H1D9 316 aaPredicted RBP15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 VTA1Q9NP79 307 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 AGPAT3Q9NRZ7 376 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 USP20Q9Y2K6 914 aa15.52■□□□□ 0.07
HMGCS2-201ENST00000369406 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 APBA1Q02410 837 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 KCNV1Q6PIU1 500 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 TAS1R3Q7RTX0 852 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 NDST4Q9H3R1 872 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 DHX33Q9H6R0 707 aaKnown RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 LARSQ9P2J5 1176 aaKnown RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 DGAT1O75907 488 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 MARSP56192 900 aaKnown RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 GTF2BQ00403 316 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 PLCB4Q15147 1175 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 BORCS6Q96GS4 357 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 TTYH3Q9C0H2 523 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 SIK3Q9Y2K2 1263 aa15.51■□□□□ 0.07
HMGCS2-201ENST00000369406 UBE4BO95155 1302 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 CEP350Q5VT06 3117 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 NOP56O00567 594 aaKnown RBP15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 CALUO43852 315 aaPredicted RBP15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 MFAP3LO75121 409 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 KIF20AO95235 890 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 MAP2K5Q13163 448 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 PAXIP1Q6ZW49 1069 aaPredicted RBP15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 GJD2Q9UKL4 321 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 KAT6AQ92794 2004 aa15.5■□□□□ 0.07
HMGCS2-201ENST00000369406 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 CCDC169A6NNP5 214 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ANKRD63C9JTQ0 380 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 CETN3O15182 167 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 DKC1O60832 514 aaKnown RBP eCLIP15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 EDN1P05305 212 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 TM4SF4P48230 202 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 DNM2P50570 870 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 CYP2J2P51589 502 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 KCNMA1Q12791 1236 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 SLC39A4Q6P5W5 647 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 GLG1Q92896 1179 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 CCDC102AQ96A19 550 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 CBWD1Q9BRT8 395 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 TIPINQ9BVW5 301 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 DMAC2Q9NW81 257 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ZNF286BP0CG31 522 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 MAPTP10636 758 aaKnown RBP15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 GLRA2P23416 452 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ACVR2BQ13705 512 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 MTF1Q14872 753 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 FAM160B1Q5W0V3 765 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 GBP3Q9H0R5 595 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 RNPEPQ9H4A4 650 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 ST6GALNAC4Q9H4F1 302 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 PCIF1Q9H4Z3 704 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 TRIP12Q14669 1992 aaPredicted RBP15.49■□□□□ 0.07
HMGCS2-201ENST00000369406 AKR1B15C9JRZ8 316 aaPredicted RBP15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 CYP2B6P20813 491 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 CYP2C19P33261 490 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 CLCN1P35523 988 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 NOLC1Q14978 699 aaKnown RBP eCLIP15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 E4F1Q66K89 784 aaPredicted RBP15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 SPTLC3Q9NUV7 552 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 DENND3A2RUS2 1198 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 FGFR1OPO95684 399 aaKnown RBP15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 IGHA2P01877 340 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 ADSSP30520 456 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 ARL2P36404 184 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 GPIHBP1Q8IV16 184 aa15.48■□□□□ 0.07
HMGCS2-201ENST00000369406 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms