RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 DHTKD1Q96HY7 919 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 ZNF668Q96K58 619 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 POLR3CQ9BUI4 534 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 MCM3APO60318 1980 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 PDHXO00330 501 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 HIP1RO75146 1068 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 PPIL2Q13356 520 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 MOGSQ13724 837 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 CCDC40Q4G0X9 1142 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 GPAT2Q6NUI2 795 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 CAGE1Q8TC20 777 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 COPS5Q92905 334 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 GBA2Q9HCG7 927 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 FAM207AQ9NSI2 230 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 ERLIN1O75477 346 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 EEF1GP26641 437 aaKnown RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 KCNV1Q6PIU1 500 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 ZBTB10Q96DT7 871 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 HINFPQ9BQA5 517 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 MYO6Q9UM54 1294 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 BICDL2A1A5D9 508 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 MACROD2A1Z1Q3 448 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 BTBD19C9JJ37 291 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 ERLIN2O94905 339 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 HOXD13P35453 343 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 QARSP47897 775 aaKnown RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 DNM2P50570 870 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 ALDH5A1P51649 535 aaPredicted RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 CYP27A1Q02318 531 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 SNAPC2Q13487 334 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 FKBP15Q5T1M5 1219 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 TTC19Q6DKK2 380 aaPredicted RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 C1orf186Q6ZWK4 172 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 CCDC60Q8IWA6 550 aaPredicted RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 SUGP1Q8IWZ8 645 aaKnown RBP11.65□□□□□ -0.54
TPM3-212ENST00000368533 NACC1Q96RE7 527 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 RIT2Q99578 217 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 PCDHA2Q9Y5H9 948 aa11.65□□□□□ -0.54
TPM3-212ENST00000368533 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 SRGAP2O75044 1071 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 P4HBP07237 508 aaKnown RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 CCT5P48643 541 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 CASP4P49662 377 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 HUNKP57058 714 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 EHHADHQ08426 723 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 TCERG1LQ5VWI1 586 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 GUF1Q8N442 669 aaKnown RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 PCIF1Q9H4Z3 704 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 PDGFCQ9NRA1 345 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 ZNF862O60290 1169 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 KCNA2P16389 499 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 NR2F2P24468 414 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 ARHGAP25P42331 645 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 CYP2J2P51589 502 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 VSNL1P62760 191 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 ADAM9Q13443 819 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 STXBP2Q15833 593 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 MTERF2Q49AM1 385 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 HSP90B2PQ58FF3 399 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 DCAF17Q5H9S7 520 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 HDXQ7Z353 690 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 LRRC27Q9C0I9 530 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 LRRIQ3A6PVS8 624 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 CXCL11O14625 94 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 FDX1P10109 184 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
TPM3-212ENST00000368533 RARRES1P49788 294 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 OAZ1P54368 228 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 BRD3Q15059 726 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 CST9Q5W186 159 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 EFCAB13Q8IY85 973 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 JAKMIP2Q96AA8 810 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 TSG101Q99816 390 aa11.64□□□□□ -0.55
TPM3-212ENST00000368533 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 K7ENM7 598 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms