RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TMEM253P0C7T8 217 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 SLC9A1P19634 815 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 KLRC1P26715 233 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 ACTN2P35609 894 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 QARSP47897 775 aaKnown RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 KRT76Q01546 638 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 C2orf54Q08AI8 447 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 BFSP1Q12934 665 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 ZNF571Q7Z3V5 609 aaPredicted RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 SLFN11Q7Z7L1 901 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 C4orf19Q8IY42 314 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 CYP2W1Q8TAV3 490 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 PIGOQ8TEQ8 1089 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 CAMKK2Q96RR4 588 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 SLITRK6Q9H5Y7 841 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 GDF3Q9NR23 364 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 APEX2Q9UBZ4 518 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 TTC7AQ9ULT0 858 aaPredicted RBP11.13□□□□□ -0.63
TPM3-209ENST00000368527 TFR2Q9UP52 801 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 ZMYM2Q9UBW7 1377 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 ZNF536O15090 1300 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 F8VZ95 297 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 CHMP2AO43633 222 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 BUB1O43683 1085 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 EXOC3O60645 756 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 RNF40O75150 1001 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 STAM2O75886 525 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 RAD17O75943 681 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 PLS3P13797 630 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 HSPA6P17066 643 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 NOP2P46087 812 aaKnown RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 SMTNP53814 917 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 OAZ1P54368 228 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 TGFB2P61812 414 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 MYL7Q01449 175 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 KIF22Q14807 665 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 DCAF15Q66K64 600 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 CIAPIN1Q6FI81 312 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 MAATS1Q7Z4T9 603 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 RHOT2Q8IXI1 618 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 CTNNBL1Q8WYA6 563 aaPredicted RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 RFFLQ8WZ73 363 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 FIZ1Q96SL8 496 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 LRRC1Q9BTT6 524 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 INTS2Q9H0H0 1204 aaKnown RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 AS3MTQ9HBK9 375 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 SLC38A10Q9HBR0 1119 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 AGO4Q9HCK5 861 aaKnown RBP11.12□□□□□ -0.63
TPM3-209ENST00000368527 KCNH7Q9NS40 1196 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 FAN1Q9Y2M0 1017 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 EP400Q96L91 3159 aa11.12□□□□□ -0.63
TPM3-209ENST00000368527 MIF4GDA9UHW6 222 aaKnown RBP11.11□□□□□ -0.63
TPM3-209ENST00000368527 WDR64B1ANS9 1081 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 HIP1RO75146 1068 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 ARP10275 920 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
TPM3-209ENST00000368527 GBP1P32455 592 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 GTF2H1P32780 548 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 LMAN1P49257 510 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 CASP4P49662 377 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 ZNF280AP59817 542 aaPredicted RBP11.11□□□□□ -0.63
TPM3-209ENST00000368527 PSMC5P62195 406 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 GTF2BQ00403 316 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 ARID5AQ03989 594 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 TKFCQ3LXA3 575 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM3-209ENST00000368527 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 PEX26Q7Z412 305 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 NLRX1Q86UT6 975 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 LRRC57Q8N9N7 239 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 TPCN2Q8NHX9 752 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 CCDC26Q8TAB7 109 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 SLC30A5Q8TAD4 765 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 FAM76AQ8TAV0 307 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 KIFAP3Q92845 792 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
TPM3-209ENST00000368527 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.11□□□□□ -0.633e-15■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms