RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 NCK2O43639 380 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 OPHN1O60890 802 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 ALCAMQ13740 583 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 DAGLAQ9Y4D2 1042 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 FAM205CA6NFA0 338 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 EPHB4P54760 987 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 MCPH1Q8NEM0 835 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 UBE4BO95155 1302 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 KRT76Q01546 638 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 IFT88Q13099 833 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 FAM167AQ96KS9 214 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 TOPORSQ9NS56 1045 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 NFU1Q9UMS0 254 aa13.83□□□□□ -0.2
PTPRK-207ENST00000368226 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
PTPRK-207ENST00000368226 HIP1RO75146 1068 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 ABCD1P33897 745 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 VAMP7P51809 220 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 RWDD2BP57060 319 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 ANO4Q32M45 955 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 FAM8A1Q9UBU6 413 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 P4HBP07237 508 aaKnown RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 SKIV2LQ15477 1246 aaKnown RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 C1orf228Q6PIY5 440 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 GBP7Q8N8V2 638 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 RABGGTAQ92696 567 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 JRKLQ9Y4A0 524 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 STX1BP61266 288 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 PDE1CQ14123 709 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 PBKQ96KB5 322 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 COPB2P35606 906 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 TSPY1Q01534 308 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 BEST2Q8NFU1 509 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 PYROXD1Q8WU10 500 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 QRICH2Q9H0J4 1663 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 RNF219Q5W0B1 726 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-207ENST00000368226 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 OR6J1Q8NGC5 347 aa13.82□□□□□ -0.2
PTPRK-207ENST00000368226 KNOP1Q1ED39 458 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SYCP2LQ5T4T6 812 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.21e-9■■□□□ 13.8
PTPRK-207ENST00000368226 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■■ 67.5
PTPRK-207ENST00000368226 SAYSD1Q9NPB0 183 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 LCP1P13796 627 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 NMT1P30419 496 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 TNFAIP2Q03169 654 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 URGCPQ8TCY9 931 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 MAML1Q92585 1016 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 FGD4Q96M96 766 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 PARD6BQ9BYG5 372 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 INTS2Q9H0H0 1204 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 FLT1P17948 1338 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SARS2Q9NP81 518 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 INTUQ9ULD6 942 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 PSMD14O00487 310 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 YWHAHQ04917 246 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-207ENST00000368226 FAM117BQ6P1L5 589 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 ANGPTL8Q6UXH0 198 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SIK2Q9H0K1 926 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 CFLARO15519 480 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 CPB1P15086 417 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 GNA15P30679 374 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 RNF149Q8NC42 400 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 SLC9A2Q9UBY0 812 aa13.81□□□□□ -0.2
PTPRK-207ENST00000368226 UPP2O95045 317 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 TRIM67Q6ZTA4 783 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ELMOD1Q8N336 334 aa13.8□□□□□ -0.2
PTPRK-207ENST00000368226 ABHD10Q9NUJ1 306 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms