RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 H7C0C1 242 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SRGAP2O75044 1071 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 PALMO75781 387 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ATP5OP48047 213 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 KRT76Q01546 638 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 DPYDQ12882 1025 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ANKRD40Q6AI12 368 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ZBTB33Q86T24 672 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 AP1M1Q9BXS5 423 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 BCAP29Q9UHQ4 241 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ZHX2Q9Y6X8 837 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 PCYT1AP49585 367 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SPP2Q13103 211 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SLFN12LQ6IEE8 588 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ZNF710Q8N1W2 664 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 NME8Q8N427 588 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 ENGASEQ8NFI3 743 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 FGD4Q96M96 766 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 CNTNAP4Q9C0A0 1308 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 XPOTO43592 962 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 TROVE2P10155 538 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 GFPT1Q06210 699 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 INTS5Q6P9B9 1019 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 MSTO1Q9BUK6 570 aa14.25□□□□□ -0.13
PTPRK-204ENST00000368210 LIMA1Q9UHB6 759 aaKnown RBP14.25□□□□□ -0.13
PTPRK-204ENST00000368210 SRGAP2CP0DJJ0 459 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 QARSP47897 775 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 GCLMP48507 274 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 TROAPQ12815 778 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 FBXW10Q5XX13 1052 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 ADSSL1Q8N142 457 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 RNF146Q9NTX7 359 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 CNTNAP5Q8WYK1 1306 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 CD58P19256 250 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 OSTNP61366 133 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 EMBQ6PCB8 327 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 CCDC188H7C350 402 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 MTF1Q14872 753 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 SNRNP48Q6IEG0 339 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 NSUN6Q8TEA1 469 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 INTS9Q9NV88 658 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 SGK1O00141 431 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 GMNNO75496 209 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 PDZD4Q76G19 769 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 EIF2AK1Q9BQI3 630 aaKnown RBP14.24□□□□□ -0.13
PTPRK-204ENST00000368210 HOXC10Q9NYD6 342 aa14.24□□□□□ -0.13
PTPRK-204ENST00000368210 CNGA1P29973 690 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 CCZ1BP86790 482 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 NNTQ13423 1086 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 GFM2Q969S9 779 aaKnown RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 ZC4H2Q9NQZ6 224 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 KIF20BQ96Q89 1820 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 FGGP02679 453 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 MRPS25P82663 173 aaKnown RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 RINT1Q6NUQ1 792 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 CAPN11Q9UMQ6 739 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 PALM3A6NDB9 673 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 BAG2O95816 211 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 NR1D1P20393 614 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 SURF1Q15526 300 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 STXBP2Q15833 593 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 E4F1Q66K89 784 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 MAP3K14Q99558 947 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 XAB2Q9HCS7 855 aaKnown RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 A6NJR5 290 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 POC1B-GALNT4F8VUJ3 575 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 STXBP3O00186 592 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 SLC16A4O15374 487 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 PDHBP11177 359 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 KCNJ6P48051 423 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 IFNAR2P48551 515 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 FAM149B1Q96BN6 582 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 FMO2Q99518 471 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 LXNQ9BS40 222 aa14.23□□□□□ -0.13
PTPRK-204ENST00000368210 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-204ENST00000368210 MAP3K7O43318 606 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 RHOBTB3O94955 611 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 NDUFB10O96000 172 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 LDHAP00338 332 aaKnown RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CHRNA5P30532 468 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 DR1Q01658 176 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms