RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HMGCS2P54868 508 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 KRT76Q01546 638 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 IFI16Q16666 785 aaKnown RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 DCAF17Q5H9S7 520 aaPredicted RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 PRRT2Q7Z6L0 340 aaPredicted RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 CPXCR1Q8N123 301 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 VTI1AQ96AJ9 217 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 RPAP3Q9H6T3 665 aaPredicted RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.04
USF1-202ENST00000368020 RNF14Q9UBS8 474 aa15.33■□□□□ 0.04
USF1-202ENST00000368020 VWA5AO00534 786 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 DHX15O43143 795 aaKnown RBP15.32■□□□□ 0.04
USF1-202ENST00000368020 TGFB1I1O43294 461 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 ZBTB48P10074 688 aaPredicted RBP15.32■□□□□ 0.04
USF1-202ENST00000368020 ERCC3P19447 782 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 PON1P27169 355 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 PRKCIP41743 596 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 HUNKP57058 714 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 GPS2Q13227 327 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 PGM5Q15124 567 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 PADI6Q6TGC4 694 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 ZNF572Q7Z3I7 529 aaPredicted RBP15.32■□□□□ 0.04
USF1-202ENST00000368020 SAPCD2Q86UD0 394 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 C4orf19Q8IY42 314 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 CAGE1Q8TC20 777 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 COL20A1Q9P218 1284 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 SNX12Q9UMY4 172 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 HYOU1Q9Y4L1 999 aa15.32■□□□□ 0.04
USF1-202ENST00000368020 COL11A1P12107 1806 aaPredicted RBP15.32■□□□□ 0.04
USF1-202ENST00000368020 WDR64B1ANS9 1081 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 N4BP1O75113 896 aaKnown RBP15.31■□□□□ 0.04
USF1-202ENST00000368020 STAM2O75886 525 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 RPS6P62753 249 aaKnown RBP15.31■□□□□ 0.04
USF1-202ENST00000368020 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
USF1-202ENST00000368020 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 GPRASP2Q96D09 838 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 BORCS6Q96GS4 357 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 FIZ1Q96SL8 496 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 STRA6Q9BX79 667 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 ST6GALNAC4Q9H4F1 302 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 GCNT4Q9P109 453 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 SAMM50Q9Y512 469 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 MYPNQ86TC9 1320 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 ENC1O14682 589 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 MAPK13O15264 365 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 TLR2O60603 784 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 HIP1RO75146 1068 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 PPP1R37O75864 691 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 FERP16591 822 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 CCND2P30279 289 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 NMT1P30419 496 aaKnown RBP15.31■□□□□ 0.04
USF1-202ENST00000368020 PSMC5P62195 406 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
USF1-202ENST00000368020 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 SYCP3Q8IZU3 236 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 AGPAT3Q9NRZ7 376 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 ANKEF1Q9NU02 776 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 TLL2Q9Y6L7 1015 aa15.31■□□□□ 0.04
USF1-202ENST00000368020 RLFQ13129 1914 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 WDR81Q562E7 1941 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 LOC285556D6RIA3 1793 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 TMEM88BA6NKF7 163 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 SFI1A8K8P3 1242 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 ATP2A1O14983 1001 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
USF1-202ENST00000368020 PLS3P13797 630 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 ABCD1P33897 745 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 GJA5P36382 358 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 GTF2A2P52657 109 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 MRPS9P82933 396 aaKnown RBP15.3■□□□□ 0.04
USF1-202ENST00000368020 CETN1Q12798 172 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 NAB2Q15742 525 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 MUM1L1Q5H9M0 696 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 SPRYD7Q5W111 196 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 ZNF746Q6NUN9 644 aaPredicted RBP15.3■□□□□ 0.04
USF1-202ENST00000368020 HDXQ7Z353 690 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
USF1-202ENST00000368020 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms