RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 DHX32Q7L7V1 743 aaKnown RBP9.24□□□□□ -0.93
SYNE1-206ENST00000367253 PATL1Q86TB9 770 aaKnown RBP9.24□□□□□ -0.93
SYNE1-206ENST00000367253 P3H4Q92791 437 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 EDC3Q96F86 508 aaKnown RBP9.24□□□□□ -0.93
SYNE1-206ENST00000367253 C2orf40Q9H1Z8 148 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 RIC8AQ9NPQ8 531 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 POLE3Q9NRF9 147 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 IMPACTQ9P2X3 320 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 GH1P01241 217 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 GYS2P54840 703 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 PLD1Q13393 1074 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 KIZQ2M2Z5 673 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 GALNT17Q6IS24 598 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 SMC5Q8IY18 1101 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 IGSF22Q8N9C0 903 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 BRF1Q92994 677 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 CRAMP1Q96RY5 1269 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 NCKAP1Q9Y2A7 1128 aa9.24□□□□□ -0.93
SYNE1-206ENST00000367253 SOS2Q07890 1332 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-206ENST00000367253 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 hCG_1984214I3L0E3 225 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ENC1O14682 589 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 HUS1O60921 280 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 MAN1A1P33908 653 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 CCT5P48643 541 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 NDUFV1P49821 464 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGAP4P98171 946 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ELAVL2Q12926 359 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ACCSLQ4AC99 568 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 GLE1Q53GS7 698 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANGEL2Q5VTE6 544 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 RGMBQ6NW40 437 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 CNNM4Q6P4Q7 775 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 SCN4BQ8IWT1 228 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 DHX58Q96C10 678 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 XAGE2Q96GT9 111 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TRIM31Q9BZY9 425 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 KIF13AQ9H1H9 1805 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 FAM95CA0A1B0GW59 222 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TMEM247A6NEH6 219 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 FARP2O94887 1054 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 RAB30Q15771 203 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 CFAP221Q4G0U5 840 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARMC3Q5W041 872 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGAP22Q7Z5H3 698 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 UBL4BQ8N7F7 174 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 OSCP1Q8WVF1 389 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 SCFD1Q8WVM8 642 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 C1orf112Q9NSG2 853 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TNFAIP3P21580 790 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 SERPINB6P35237 376 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 CHRNDQ07001 517 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 KLC1Q07866 573 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TBCCQ15814 346 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANKRD20A4Q4UJ75 823 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANKRD20A8PQ5CZ79 823 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANKRD20A2Q5SQ80 823 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANKRD20A1Q5TYW2 823 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TMC5Q6UXY8 1006 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 SPATA2LQ8IUW3 424 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 TRIM48Q8IWZ4 208 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 NECAB1Q8N987 351 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ANKRD42Q8N9B4 389 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ZNF483Q8TF39 744 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGAP45Q92619 1136 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 THOC1Q96FV9 657 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 DNAJC7Q99615 494 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 FHDC1Q9C0D6 1143 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 NFU1Q9UMS0 254 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGAP23Q9P227 1491 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ELP1O95163 1332 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 DYNC1LI2O43237 492 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 DEXIO95424 95 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 EEF1DP29692 281 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 IFNAR2P48551 515 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 MRPS35P82673 323 aaKnown RBP9.23□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 DIP2AQ14689 1571 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 FER1L4A9Z1Z3 1794 aa9.23□□□□□ -0.93
SYNE1-206ENST00000367253 KANSL1LA0AUZ9 987 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 GOLGA8RI6L899 631 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 TRIM66O15016 1216 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 P4HA2O15460 535 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 GUCY1B2O75343 617 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 VAMP4O75379 141 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 KRT3P12035 628 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 CRKP46108 304 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 PPIGQ13427 754 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYNE1-206ENST00000367253 SNRNP48Q6IEG0 339 aaKnown RBP9.22□□□□□ -0.93
SYNE1-206ENST00000367253 IFNL1Q8IU54 200 aa9.22□□□□□ -0.93
SYNE1-206ENST00000367253 TMTC1Q8IUR5 882 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms