RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PLXNA4Q9HCM2 1894 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 M0R2N6 131 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 TDP2O95551 362 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 SRGAP2BP0DMP2 458 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 LTBRP36941 435 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 FAM189BP81408 668 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 ZP2Q05996 745 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 CAMK1Q14012 370 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 DSC3Q14574 896 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 UGCGQ16739 394 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 FAM102BQ5T8I3 360 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 EFHBQ8N7U6 833 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 MICAL1Q8TDZ2 1067 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 WASF1Q92558 559 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 MBOAT7Q96N66 472 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 NIFKQ9BYG3 293 aaKnown RBP16.68■□□□□ 0.26
CTSD-202ENST00000367196 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 CD320Q9NPF0 282 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 PUF60Q9UHX1 559 aaKnown RBP16.68■□□□□ 0.26
CTSD-202ENST00000367196 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
CTSD-202ENST00000367196 ARIH1Q9Y4X5 557 aaPredicted RBP16.68■□□□□ 0.26
CTSD-202ENST00000367196 EDIL3O43854 480 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 TBX10O75333 385 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 FGF18O76093 207 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 SFPQP23246 707 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSD-202ENST00000367196 DNAJB1P25685 340 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 PPM1AP35813 382 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 ANAPC15P60006 121 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 ADAM15Q13444 863 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 TARBP2Q15633 366 aaKnown RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 LETM2Q2VYF4 491 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 CDCA3Q99618 268 aaPredicted RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
CTSD-202ENST00000367196 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 INO80BQ9C086 356 aaPredicted RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 TYW1Q9NV66 732 aaKnown RBP16.67■□□□□ 0.26
CTSD-202ENST00000367196 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 MBTPS2O43462 519 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 DCXO43602 365 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 FGFR1P11362 822 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 NRIP1P48552 1158 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 PSMC5P62195 406 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 SCRN1Q12765 414 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 CLUL1Q15846 466 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 INF2Q27J81 1249 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 MTERF2Q49AM1 385 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 B3GNT9Q6UX72 402 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 NEK8Q86SG6 692 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 MRPL9Q9BYD2 267 aaKnown RBP16.66■□□□□ 0.26
CTSD-202ENST00000367196 TLE6Q9H808 572 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 PPME1Q9Y570 386 aa16.66■□□□□ 0.26
CTSD-202ENST00000367196 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 TBX3O15119 743 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 MARCH6O60337 910 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 PFKFB2O60825 505 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 EOMESO95936 686 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.265e-6■■■■□ 24.4
CTSD-202ENST00000367196 IRS1P35568 1242 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 PLCB3Q01970 1234 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 KRT17Q04695 432 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 DLX2Q07687 328 aaPredicted RBP16.65■□□□□ 0.26
CTSD-202ENST00000367196 COASYQ13057 564 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 PPP2R5CQ13362 524 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 NPY5RQ15761 445 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 ADGRD2Q7Z7M1 963 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 ECHDC2Q86YB7 292 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 KHSRPQ92945 711 aaKnown RBP eCLIP16.65■□□□□ 0.26
CTSD-202ENST00000367196 GJA10Q969M2 543 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 FAM122AQ96E09 287 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 ZNF558Q96NG5 402 aa16.65■□□□□ 0.26
CTSD-202ENST00000367196 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
CTSD-202ENST00000367196 IGKV6-21A0A0C4DH24 114 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 LINC01565O15544 149 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 EYA4O95677 639 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 SKIP12755 728 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 PLA2G5P39877 138 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 QARSP47897 775 aaKnown RBP16.64■□□□□ 0.25
CTSD-202ENST00000367196 BMS1Q14692 1282 aaKnown RBP16.64■□□□□ 0.25
CTSD-202ENST00000367196 RBM23Q86U06 439 aaKnown RBP16.64■□□□□ 0.25
CTSD-202ENST00000367196 SMRP1Q8NCR6 262 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 SLC7A3Q8WY07 619 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
CTSD-202ENST00000367196 AIFM3Q96NN9 605 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 CASD1Q96PB1 797 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 CWH43Q9H720 699 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 NGRNQ9NPE2 291 aaKnown RBP16.64■□□□□ 0.25
CTSD-202ENST00000367196 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
CTSD-202ENST00000367196 FAM86C2PA6NEL3 165 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms