RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 TUBB4AP04350 444 aa10.26□□□□□ -0.77
CNIH4-202ENST00000366857 PLEKP08567 350 aaPredicted RBP10.26□□□□□ -0.77
CNIH4-202ENST00000366857 EIF2AK2P19525 551 aaKnown RBP10.26□□□□□ -0.77
CNIH4-202ENST00000366857 IREB2P48200 963 aaKnown RBP10.26□□□□□ -0.77
CNIH4-202ENST00000366857 DLG4P78352 724 aa10.26□□□□□ -0.77
CNIH4-202ENST00000366857 FLRT1Q9NZU1 646 aa10.26□□□□□ -0.77
CNIH4-202ENST00000366857 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
CNIH4-202ENST00000366857 WDR64B1ANS9 1081 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 TISP43B9A030 160 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 ANKRD63C9JTQ0 380 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 HAS3O00219 553 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 MSCO60682 206 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 GAS7O60861 476 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 POU5F1BQ06416 359 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 C17orf99Q6UX52 265 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 LIMS2Q7Z4I7 341 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 MROH8Q9H579 483 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 ABCB6Q9NP58 842 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 SSU72P8A0A1W2PR75 194 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 GNA14O95837 355 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 ERCC3P19447 782 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 KLHDC7AQ5VTJ3 777 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 PAPD7Q5XG87 772 aaKnown RBP10.25□□□□□ -0.77
CNIH4-202ENST00000366857 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
CNIH4-202ENST00000366857 MRFAP1Q9Y605 127 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 BECN2A8MW95 431 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 NR3C1P04150 777 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 COPB2P35606 906 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 PPP2R5AQ15172 486 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 FAM187BQ17R55 369 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 HSP90AA4PQ58FG1 418 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 KSR1Q8IVT5 923 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 PARVGQ9HBI0 331 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 CYP26B1Q9NR63 512 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 CEP72Q9P209 647 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 FAM184BQ9ULE4 1060 aa10.25□□□□□ -0.77
CNIH4-202ENST00000366857 NPTX2P47972 431 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 CYP4A11Q02928 519 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 CCDC65Q8IXS2 484 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 VPS16Q9H269 839 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 JPH1Q9HDC5 661 aaPredicted RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 HADHBP55084 474 aaKnown RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 KIF22Q14807 665 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 CCDC170Q8IYT3 715 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 LRRC57Q8N9N7 239 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 UIMC1Q96RL1 719 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 NUP58Q9BVL2 599 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 LACRTQ9GZZ8 138 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 FBXO40Q9UH90 709 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 SCN1AP35498 2009 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 IGF2BP3O00425 579 aaKnown RBP eCLIP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 ALCAMQ13740 583 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 CNGA4Q8IV77 575 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 ERMNQ8TAM6 284 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 EHMT1Q9H9B1 1298 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 SLC9A2Q9UBY0 812 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 TCRBV5S1A1TA0A578 114 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 GOLGA6L6A8MZA4 724 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 PRPF6O94906 941 aaKnown RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 GLRA2P23416 452 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 TM4SF4P48230 202 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 PPP3CAQ08209 521 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 GRM1Q13255 1194 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 HELQQ8TDG4 1101 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 ASAP3Q8TDY4 903 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 TMEM59LQ9UK28 342 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 NOCTQ9UK39 431 aaKnown RBP10.24□□□□□ -0.77
CNIH4-202ENST00000366857 TBX20Q9UMR3 447 aa10.24□□□□□ -0.77
CNIH4-202ENST00000366857 MKI67P46013 3256 aaKnown RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 ZNF865P0CJ78 1059 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 DRP2Q13474 957 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 HSDL1Q3SXM5 330 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 METTL7BQ6UX53 244 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 FASTKD5Q7L8L6 764 aaKnown RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 TRAPPC11Q7Z392 1133 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 GPRC5CQ9NQ84 441 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 NDUFA10O95299 355 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 ZSCAN20P17040 1043 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 CCSAPQ6IQ19 270 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 IQCA1LA6NCM1 817 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 C22orf31O95567 290 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 SLC10A3P09131 477 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 H2AFXP16104 143 aaPredicted RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 ZNF132P52740 706 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 ETF1P62495 437 aaKnown RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 NCBP1Q09161 790 aaKnown RBP10.23□□□□□ -0.77
CNIH4-202ENST00000366857 PLA2G4FQ68DD2 849 aa10.23□□□□□ -0.77
CNIH4-202ENST00000366857 MBLAC1A4D2B0 266 aaPredicted RBP10.22□□□□□ -0.77
CNIH4-202ENST00000366857 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
CNIH4-202ENST00000366857 P4HA2O15460 535 aa10.22□□□□□ -0.77
CNIH4-202ENST00000366857 VNN1O95497 513 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms