RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SLC8A3P57103 927 aa21.29■■□□□ 1
TRIM58-201ENST00000366481 KCNH2Q12809 1159 aa21.29■■□□□ 1
TRIM58-201ENST00000366481 ASTE1Q2TB18 679 aaPredicted RBP21.29■■□□□ 1
TRIM58-201ENST00000366481 LACTB2Q53H82 288 aaPredicted RBP21.29■■□□□ 1
TRIM58-201ENST00000366481 FMO2Q99518 471 aa21.29■■□□□ 1
TRIM58-201ENST00000366481 CNOT10Q9H9A5 744 aaKnown RBP21.29■■□□□ 1
TRIM58-201ENST00000366481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.29■■□□□ 1
TRIM58-201ENST00000366481 NFS1Q9Y697 457 aa21.29■■□□□ 1
TRIM58-201ENST00000366481 CHMP2AO43633 222 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 MYBL1P10243 752 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 CYP11B2P19099 503 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 PLTPP55058 493 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 PDIA5Q14554 519 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 RNF217Q8TC41 542 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 KLHL29Q96CT2 875 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 ZBTB39O15060 712 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 PPIP5K2O43314 1243 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 MYBP10242 640 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 COPB2P35606 906 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 KCNJ2P63252 427 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 GABPAQ06546 454 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 ARSHQ5FYA8 562 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 CDC42EP5Q6NZY7 148 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 BZW1Q7L1Q6 419 aaKnown RBP21.28■■□□□ 1
TRIM58-201ENST00000366481 TRPM8Q7Z2W7 1104 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 ZC3H12CQ9C0D7 883 aaKnown RBP21.28■■□□□ 1
TRIM58-201ENST00000366481 PCDHB13Q9Y5F0 798 aa21.28■■□□□ 1
TRIM58-201ENST00000366481 EME2A4GXA9 379 aaPredicted RBP21.27■■□□□ 1
TRIM58-201ENST00000366481 RTN2O75298 545 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 CASP4P49662 377 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 CCDC38Q502W7 563 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 ZCWPW2Q504Y3 356 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 SFR1Q86XK3 245 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 C1orf131Q8NDD1 294 aaKnown RBP21.27■■□□□ 1
TRIM58-201ENST00000366481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 1
TRIM58-201ENST00000366481 SPDYE3A6NKU9 549 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 EEF2P13639 858 aaKnown RBP21.27■■□□□ 1
TRIM58-201ENST00000366481 POLD1P28340 1107 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 LRRC14Q15048 493 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 CCDC65Q8IXS2 484 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 PIGOQ8TEQ8 1089 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 AZI2Q9H6S1 392 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 RGL1Q9NZL6 768 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 CEP72Q9P209 647 aa21.27■■□□□ 1
TRIM58-201ENST00000366481 PTK2Q05397 1052 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 DENND2CQ68D51 928 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 TMC3Q7Z5M5 1100 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 METTL13Q8N6R0 699 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 ANO3Q9BYT9 981 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 FAM129AQ9BZQ8 928 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 NSRP1Q9H0G5 558 aaKnown RBP21.27■□□□□ 0.99
TRIM58-201ENST00000366481 ABCF3Q9NUQ8 709 aa21.27■□□□□ 0.99
TRIM58-201ENST00000366481 DDX60LQ5H9U9 1706 aaKnown RBP21.26■□□□□ 0.99
TRIM58-201ENST00000366481 GAKO14976 1311 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 KRT13P13646 458 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 IFI16Q16666 785 aaKnown RBP21.26■□□□□ 0.99
TRIM58-201ENST00000366481 CATSPER3Q86XQ3 398 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 SLF2Q8IX21 1173 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 MLXIPLQ9NP71 852 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 F8VZ95 297 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 GHRP10912 638 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 SEPT2Q15019 361 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 CCDC25Q86WR0 208 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 PBKQ96KB5 322 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.26■□□□□ 0.99
TRIM58-201ENST00000366481 BATF3Q9NR55 127 aa21.26■□□□□ 0.99
TRIM58-201ENST00000366481 SHBGP04278 402 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 NUCKS1Q9H1E3 243 aaKnown RBP21.25■□□□□ 0.99
TRIM58-201ENST00000366481 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 AJAP1Q9UKB5 411 aaPredicted RBP21.25■□□□□ 0.99
TRIM58-201ENST00000366481 KIF3CO14782 793 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 FGGP02679 453 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 ECHS1P30084 290 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 PLS1Q14651 629 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 ERMARDQ5T6L9 678 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 ECT2Q9H8V3 914 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 HDAC9Q9UKV0 1011 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 PCDHGC5Q9Y5F6 944 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 DDTLA6NHG4 134 aaPredicted RBP21.25■□□□□ 0.99
TRIM58-201ENST00000366481 IGF2BP3O00425 579 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRIM58-201ENST00000366481 UBOX5O94941 541 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 TRIM59Q8IWR1 403 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 PARD3BQ8TEW8 1205 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.25■□□□□ 0.998e-9■■■■■ 34.4
TRIM58-201ENST00000366481 REEP2Q9BRK0 252 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 BHMT2Q9H2M3 363 aa21.25■□□□□ 0.99
TRIM58-201ENST00000366481 SEPT11Q9NVA2 429 aaKnown RBP21.25■□□□□ 0.99
TRIM58-201ENST00000366481 C5orf60A6NFR6 353 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 EVI5O60447 810 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 SNHG28P0DPA3 235 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 EGFL6Q8IUX8 553 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 SPDYE1Q8NFV5 336 aaPredicted RBP21.24■□□□□ 0.99
TRIM58-201ENST00000366481 ZNF483Q8TF39 744 aaPredicted RBP21.24■□□□□ 0.99
TRIM58-201ENST00000366481 SLFN13Q68D06 897 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 OTUD6AQ7L8S5 288 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 ZNF571Q7Z3V5 609 aaPredicted RBP21.24■□□□□ 0.99
TRIM58-201ENST00000366481 CPSF2Q9P2I0 782 aaKnown RBP21.24■□□□□ 0.99
TRIM58-201ENST00000366481 SNX24Q9Y343 169 aa21.24■□□□□ 0.99
TRIM58-201ENST00000366481 A8MUI8 341 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 CETN3O15182 167 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms