RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 THPOP40225 353 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 PRPHP41219 470 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 NDUFV1P49821 464 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 CAMK1Q14012 370 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 KIAA0753Q2KHM9 967 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 SEPT14Q6ZU15 432 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 FIBCD1Q8N539 461 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 SMRP1Q8NCR6 262 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 SEPT8Q92599 483 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 TAAR1Q96RJ0 339 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 BMPR1AP36894 532 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 GRIN1Q05586 938 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 TYRO3Q06418 890 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 COASYQ13057 564 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 AP3B2Q13367 1082 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 UVSSAQ2YD98 709 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 JAKMIP3Q5VZ66 844 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 SERINC5Q86VE9 423 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 CKAP2LQ8IYA6 745 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 NAP1L4Q99733 375 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 RWDD3Q9Y3V2 267 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 FANCMQ8IYD8 2048 aa12.6□□□□□ -0.39
CSNK1E-202ENST00000366216 CAVIN2O95810 425 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 LONP1P36776 959 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 NBL1P41271 181 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 EMID1Q96A84 441 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 CLEC1BQ9P126 229 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 DNAH14Q0VDD8 3507 aa12.59□□□□□ -0.39
CSNK1E-202ENST00000366216 NCOR2Q9Y618 2525 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 PIK3CDO00329 1044 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 MEIS2O14770 477 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 SORBS3O60504 671 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 RGS20O76081 388 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 CSPG5O95196 566 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 GCFC2P16383 781 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 ICAM3P32942 547 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 UBE2SQ16763 222 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 LETM2Q2VYF4 491 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 DTHD1Q6ZMT9 781 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 PPTC7Q8NI37 304 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 TMEM60Q9H2L4 133 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 ADGRA3Q8IWK6 1321 aa12.58□□□□□ -0.4
CSNK1E-202ENST00000366216 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 EDIL3O43854 480 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 NEMFO60524 1076 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 CCNT1O60563 726 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 OR52Z1P0C646 297 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 DNAJB1P25685 340 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 HOXC8P31273 242 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 USP11P51784 963 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 IL17AQ16552 155 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 PTPN21Q16825 1174 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 USH1GQ495M9 461 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 SPECC1Q5M775 1068 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 EFHBQ8N7U6 833 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 CNNM3Q8NE01 707 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 CCDC34Q96HJ3 373 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 PLVAPQ9BX97 442 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 TELO2Q9Y4R8 837 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 ABCB11O95342 1321 aa12.57□□□□□ -0.4
CSNK1E-202ENST00000366216 ACACBO00763 2458 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 GLP2RO95838 553 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 PDGFBP01127 241 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms