RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SEC23AQ15436 765 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CHRNA2Q15822 529 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CCDC38Q502W7 563 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TTC38Q5R3I4 469 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 BTBD8Q5XKL5 378 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TTLL5Q6EMB2 1281 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PPP4R3AQ6IN85 833 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PGBD2Q6P3X8 592 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 THAP5Q7Z6K1 395 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FAM20CQ8IXL6 584 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CCDC89Q8N998 374 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMEM52Q8NDY8 209 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KLHDC4Q8TBB5 520 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FATE1Q969F0 183 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KIAA1191Q96A73 305 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LENG1Q96BZ8 264 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FCRL2Q96LA5 508 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PPM1MQ96MI6 270 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PTPN18Q99952 460 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ACE2Q9BYF1 805 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CD244Q9BZW8 370 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KCTD10Q9H3F6 313 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SEMA4AQ9H3S1 761 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ERVK13-1Q9NX77 482 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 DPP7Q9UHL4 492 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TPCN1Q9ULQ1 816 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LIMCH1Q9UPQ0 1083 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ZNF281Q9Y2X9 895 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SNX13Q9Y5W8 968 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMEM82A0PJX8 343 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ELL2O00472 640 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 GNB5O14775 395 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KPNA5O15131 536 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 RNASEH2AO75792 299 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PRPF6O94906 941 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FUCA1P04066 466 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TNFAIP3P21580 790 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 EDNRBP24530 442 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LTKP29376 864 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 STT3AP46977 705 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LGALS4P56470 323 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 HERVK_113P62684 666 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 NRG1Q02297 640 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 GAB4Q2WGN9 574 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CCDC157Q569K6 752 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 EMC4Q5J8M3 183 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ZBTB41Q5SVQ8 909 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 INTS11Q5TA45 600 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SWSAP1Q6NVH7 229 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KLHDC10Q6PID8 442 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SHISA2Q6UWI4 295 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 RSRC2Q7L4I2 434 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMPRSS7Q7RTY8 843 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 MAATS1Q7Z4T9 603 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SYTL1Q8IYJ3 562 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ZSCAN18Q8TBC5 510 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PHOSPHO1Q8TCT1 267 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PLEKHO2Q8TD55 490 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 WHAMMQ8TF30 809 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SLC16A10Q8TF71 515 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 HDAC10Q969S8 669 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 UTP4Q969X6 686 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LTV1Q96GA3 475 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMEM41AQ96HV5 264 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TUBGCP5Q96RT8 1024 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 C22orf23Q9BZE7 217 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PDGFDQ9GZP0 370 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KCNF1Q9H3M0 494 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KIAA1586Q9HCI6 787 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 RIC8BQ9NVN3 520 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PDP2Q9P2J9 529 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 GULP1Q9UBP9 304 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ZC3H7BQ9UGR2 993 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CDC23Q9UJX2 597 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 USP21Q9UK80 565 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMPRSS11EQ9UL52 423 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ASB1Q9Y576 335 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SLC4A7Q9Y6M7 1214 aa4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SETD1BQ9UPS6 1966 aaKnown RBP4.45□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FAM90A27PA6NNH2 459 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 BTBD11A6QL63 1104 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 C9orf172C9J069 976 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FAM229AH3BQW9 127 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 J3KRW8 73 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 M0R3H8 397 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TERTO14746 1132 aaKnown RBP4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 PHGDHO43175 533 aaKnown RBP4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 NCK2O43639 380 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FGF18O76093 207 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CNOT4O95628 575 aaKnown RBP4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 C4BPAP04003 597 aaKnown RBP4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 THP07101 528 aa4.44□□□□□ -1.7
RNU6-1249P-201ENST00000363237 RPL10P27635 214 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms