RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 CPSF2Q9P2I0 782 aaKnown RBP13.25□□□□□ -0.29
RBM39-203ENST00000361162 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
RBM39-203ENST00000361162 GAKO14976 1311 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 MYO3BQ8WXR4 1341 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 KLHL33A6NCF5 533 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 TCP11X1B4DZS4 312 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
RBM39-203ENST00000361162 GSTA1P08263 222 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 FGFR4P22455 802 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 EPS15P42566 896 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 PMS2P54278 862 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 PPP4CP60510 307 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 ITIH4Q14624 930 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 PNMA1Q8ND90 353 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 OSBPL1AQ9BXW6 950 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 PIDD1Q9HB75 910 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 ERVK-5Q9HDB9 667 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
RBM39-203ENST00000361162 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
RBM39-203ENST00000361162 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 SNX3O60493 162 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 KCNA3P22001 575 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 KIF5BP33176 963 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 TFAP4Q01664 338 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 LLGL1Q15334 1064 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 DENND2CQ68D51 928 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 ANKRD42Q8N9B4 389 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 GDAP1Q8TB36 358 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
RBM39-203ENST00000361162 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 TSG101Q99816 390 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
RBM39-203ENST00000361162 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 ZHX3Q9H4I2 956 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 CORO1CQ9ULV4 474 aaPredicted RBP13.24□□□□□ -0.29
RBM39-203ENST00000361162 PPFIA2O75334 1257 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 CCND1P24385 295 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 MSH2P43246 934 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
RBM39-203ENST00000361162 TUBP50607 506 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 BLMHQ13867 455 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 GJB7Q6PEY0 223 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
RBM39-203ENST00000361162 HOOK3Q86VS8 718 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 CENPTQ96BT3 561 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
RBM39-203ENST00000361162 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 LDHCP07864 332 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 ZBTB48P10074 688 aaPredicted RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 PTGER2P43116 358 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 NAPAP54920 295 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 IRF2BP2Q7Z5L9 587 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 CCDC25Q86WR0 208 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 EIF1ADQ8N9N8 165 aaKnown RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 CCHCR1Q8TD31 782 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 TBCKQ8TEA7 893 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 ETAA1Q9NY74 926 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 SPDYE5A6NIY4 337 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 STXBP3O00186 592 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 LGR5O75473 907 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 SNUPNO95149 360 aaKnown RBP13.23□□□□□ -0.29
RBM39-203ENST00000361162 ABCB4P21439 1286 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 COPS2P61201 443 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 NEK9Q8TD19 979 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 IL17RBQ9NRM6 502 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
RBM39-203ENST00000361162 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
RBM39-203ENST00000361162 SMIM24O75264 130 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 USP17L8P0C7I0 530 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 KRT13P13646 458 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 PLCG2P16885 1265 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 ATP4AP20648 1035 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 DR1Q01658 176 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 U2AF1L4Q8WU68 220 aaKnown RBP13.22□□□□□ -0.29
RBM39-203ENST00000361162 NSUN4Q96CB9 384 aaKnown RBP13.22□□□□□ -0.29
RBM39-203ENST00000361162 AK8Q96MA6 479 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 PABPC3Q9H361 631 aaKnown RBP13.22□□□□□ -0.29
RBM39-203ENST00000361162 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
RBM39-203ENST00000361162 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms