RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 HERVK_113P62684 666 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 DARS2Q6PI48 645 aaKnown RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 TRIM50Q86XT4 487 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 CPXCR1Q8N123 301 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 DRC3Q9H069 523 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 DONSONQ9NYP3 566 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 GIPC1O14908 333 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 HNRNPCL1O60812 293 aaKnown RBP14.95□□□□□ -0.02
SMC5-201ENST00000361138 ZWINTO95229 277 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 TNNC2P02585 160 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ACTN1P12814 892 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ICA1Q05084 483 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 PCGF5Q86SE9 256 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 TMBIM4Q9HC24 238 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 IRAK4Q9NWZ3 460 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 USP31Q70CQ4 1352 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 IGF2BP3O00425 579 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMC5-201ENST00000361138 ZBED4O75132 1171 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 PHF2O75151 1096 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 CYP2D6P10635 497 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 SATB1Q01826 763 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 KLC1Q07866 573 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 RPS6KA2Q15349 733 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 NAALADL2Q58DX5 795 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 KRT80Q6KB66 452 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 TRIM9Q9C026 710 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
SMC5-201ENST00000361138 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 DNAJC8O75937 253 aaPredicted RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 TMPRSS15P98073 1019 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 ITIH4Q14624 930 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 DRAP1Q14919 205 aaPredicted RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 KLHL38Q2WGJ6 581 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 MAP7D3Q8IWC1 876 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 DEPDC1BQ8WUY9 529 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 INTS2Q9H0H0 1204 aaKnown RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 LMTK2Q8IWU2 1503 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 COPEO14579 308 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 TRIML2Q8N7C3 387 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 PDZD8Q8NEN9 1154 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 DBR1Q9UK59 544 aaKnown RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 MAP2K7O14733 419 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 SOX5P35711 763 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 ARL4CP56559 192 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 CNOT8Q9UFF9 292 aaKnown RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 TTC4O95801 387 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 PHEXP78562 749 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 KRT17Q04695 432 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 PPP2R5CQ13362 524 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 FRMD5Q7Z6J6 570 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 KIF2BQ8N4N8 673 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 KCTD6Q8NC69 237 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 GIMAP8Q8ND71 665 aaPredicted RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 HEMGNQ9BXL5 484 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 CCSER1Q9C0I3 900 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 SFI1A8K8P3 1242 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 RAPGEF5Q92565 580 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
SMC5-201ENST00000361138 TMEM260Q9NX78 707 aa14.94□□□□□ -0.02
SMC5-201ENST00000361138 PNPLA7Q6ZV29 1317 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 HNRNPDLO14979 420 aaKnown RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 MX2P20592 715 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 ATP2B4P23634 1241 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TTLL12Q14166 644 aaPredicted RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 CTTNQ14247 550 aaKnown RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 LONRF1Q17RB8 773 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 PDIK1LQ8N165 341 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 WDR11Q9BZH6 1224 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 SMYD3Q9H7B4 428 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 CDK8P49336 464 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TBX2Q13207 712 aaPredicted RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 ALCAMQ13740 583 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TRMT10CQ7L0Y3 403 aaKnown RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 LRRC43Q8N309 656 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 HIPK4Q8NE63 616 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 CAVIN3Q969G5 261 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 MIS12Q9H081 205 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 CFAP69A5D8W1 941 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 FTLP02792 175 aaPredicted RBP14.93□□□□□ -0.02
SMC5-201ENST00000361138 COPS2P61201 443 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 ARHGEF16Q5VV41 709 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 TBC1D9BQ66K14 1250 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 NSMCE1Q8WV22 266 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 BHMT2Q9H2M3 363 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMC5-201ENST00000361138 PRLRP16471 622 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 GLYCTKQ8IVS8 523 aa14.93□□□□□ -0.02
SMC5-201ENST00000361138 CSRNP1Q96S65 589 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms