RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TNFAIP2Q03169 654 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 CUL4BQ13620 913 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 LRCH2Q5VUJ6 765 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 CYP26C1Q6V0L0 522 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ZNF365Q70YC5 407 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ELOA2Q8IYF1 753 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 TSEN2Q8NCE0 465 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 OSBP2Q969R2 916 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ATG4CQ96DT6 458 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 CCDC51Q96ER9 411 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 KLC4Q9NSK0 619 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 SCN10AQ9Y5Y9 1956 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 PDE6AP16499 860 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 RDXP35241 583 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 ZAP70P43403 619 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 TOB1P50616 345 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 SKOR1P84550 965 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 DPYDQ12882 1025 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ITGA7Q13683 1181 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 B4GALNT4Q76KP1 1039 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 SENP2Q9HC62 589 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 RBM28Q9NW13 759 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 FBXO2Q9UK22 296 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 ODF2LQ9ULJ1 636 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 GOLGA8KD6RF30 607 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 FSCN1Q16658 493 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 DUSP28Q4G0W2 176 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 FKBP15Q5T1M5 1219 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 PAPD7Q5XG87 772 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 ARMCX2Q7L311 632 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 TRIML1Q8N9V2 468 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ACER1Q8TDN7 264 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 NUP88Q99567 741 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 CENPHQ9H3R5 247 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCL28-201ENST00000361115 EPN1Q9Y6I3 576 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 NEBLO76041 1014 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 NDUFA10O95299 355 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 PDHBP11177 359 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 KRT9P35527 623 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 ADD2P35612 726 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 EPHB4P54760 987 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 NAP1L1P55209 391 aaKnown RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 WLSQ5T9L3 541 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 RNF187Q5TA31 235 aaPredicted RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 KCTD16Q68DU8 428 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 BTNL9Q6UXG8 535 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 IQCA1Q86XH1 822 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 SPATA20Q8TB22 786 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 JAKMIP2Q96AA8 810 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 VPS16Q9H269 839 aa8.46□□□□□ -1.05
CCL28-201ENST00000361115 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.05
CCL28-201ENST00000361115 ITIH6Q6UXX5 1313 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 A0A087X0B3 334 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 RASSF9O75901 435 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 GCFC2P16383 781 aaKnown RBP8.46□□□□□ -1.06
CCL28-201ENST00000361115 AFMP43652 599 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 CDK8P49336 464 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 KRT31Q15323 416 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 NAA35Q5VZE5 725 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 CCDC13Q8IYE1 715 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 KIRREL3Q8IZU9 778 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.06
CCL28-201ENST00000361115 SLC40A1Q9NP59 571 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.06
CCL28-201ENST00000361115 FRMD3A2A2Y4 597 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 RANBP6O60518 1105 aaKnown RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 FGAP02671 866 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 SMTNP53814 917 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 GUCY1A3Q02108 690 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 APBA1Q02410 837 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 GHRHRQ02643 423 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 PPARAQ07869 468 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 NAIF1Q69YI7 327 aaPredicted RBP8.45□□□□□ -1.06
CCL28-201ENST00000361115 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 TLK2Q86UE8 772 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 FAM228AQ86W67 206 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 HERC6Q8IVU3 1022 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 TAB2Q9NYJ8 693 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 ZNF536O15090 1300 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 N4BP3O15049 544 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 TTLL1O95922 423 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 SLC7A5Q01650 507 aa8.45□□□□□ -1.06
CCL28-201ENST00000361115 CCDC122Q5T0U0 273 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms