RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 GPRC5CQ9NQ84 441 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 XPNPEP1Q9NQW7 623 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 K7ENM7 598 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GNA14O95837 355 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TPM2P07951 284 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 RFC5P40937 340 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 NCKAP1LP55160 1127 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ZC2HC1CQ53FD0 456 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CEP89Q96ST8 783 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TUBGCP2Q9BSJ2 902 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 VPS16Q9H269 839 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 DHX33Q9H6R0 707 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ZHX1Q9UKY1 873 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 MGAMO43451 1857 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ZMYM2Q9UBW7 1377 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TEX33O43247 280 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 PBX1P40424 430 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 MTIF2P46199 727 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 POLGP54098 1239 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 EMC2Q15006 297 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 NFIL3Q16649 462 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SPECC1LQ69YQ0 1117 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ATP8B4Q8TF62 1192 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SPIRE2Q8WWL2 714 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 EEF2KMTQ96G04 330 aa23.1■■□□□ 1.29
MAP1LC3A-201ENST00000360668 LGALS16A8MUM7 142 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CETN3O15182 167 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ECM2O94769 699 aaPredicted RBP23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SMTNP53814 917 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 PEX3P56589 373 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 KCNA1Q09470 495 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 DMP1Q13316 513 aaPredicted RBP23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ADAM9Q13443 819 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 NTPCRQ9BSD7 190 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 FLRT1Q9NZU1 646 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 KCNG1Q9UIX4 513 aa23.09■■□□□ 1.29
MAP1LC3A-201ENST00000360668 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TGFB1I1O43294 461 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SMPD1P17405 629 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 RPL13P26373 211 aaKnown RBP23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 FCGRTP55899 365 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 MARSP56192 900 aaKnown RBP23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GTF2BQ00403 316 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GJC2Q5T442 439 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TNS4Q8IZW8 715 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GOLGA5Q8TBA6 731 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SLC7A3Q8WY07 619 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TMEM206Q9H813 350 aa23.08■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ITIH6Q6UXX5 1313 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 IGHA2P01877 340 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CYP2B6P20813 491 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 NR2F2P24468 414 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CTGFP29279 349 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 PLCB4Q15147 1175 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 HAUS6Q7Z4H7 955 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 EXOC8Q8IYI6 725 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CCDC150Q8NCX0 1101 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 HVCN1Q96D96 273 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 ZNF830Q96NB3 372 aaPredicted RBP23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 ACCSQ96QU6 501 aa23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3A-201ENST00000360668 NR3C1P04150 777 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 NPTX2P47972 431 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 TBX2Q13207 712 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 HS2ST1Q7LGA3 356 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 AFG1LQ8WV93 481 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 IFT74Q96LB3 600 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 GBP3Q9H0R5 595 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 POLR3FQ9H1D9 316 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 KCNF1Q9H3M0 494 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 ERAP1Q9NZ08 941 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 SLC16A4O15374 487 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 MAFO75444 373 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 HOXD8P13378 290 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 ABCD1P33897 745 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 DNM2P50570 870 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 LACTBP83111 547 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 UBXN1Q04323 297 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CCL14Q16627 93 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 MAN2A1Q16706 1144 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 TMEM161BQ8NDZ6 487 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 BSNDQ8WZ55 320 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 KMT5AQ9NQR1 393 aa23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CGNQ9P2M7 1197 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3A-201ENST00000360668 A0A1W2PQC6 194 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 CCDC169A6NNP5 214 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 H0YCG3 227 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 SLC16A3O15427 465 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 GAS2O43903 313 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 HBP1O60381 514 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 LGALS2P05162 132 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 ZNF865P0CJ78 1059 aaPredicted RBP23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 XRCC5P13010 732 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 SCP2P22307 547 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 MARK3P27448 753 aa23.05■■□□□ 1.28
MAP1LC3A-201ENST00000360668 PSMC4P43686 418 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms