RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 DNA2P51530 1060 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 CYP2J2P51589 502 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 NIM1KQ8IY84 436 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 DAW1Q8N136 415 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 USP38Q8NB14 1042 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 ZNF341Q9BYN7 854 aa28.73■■■□□ 2.19
CUEDC1-201ENST00000360238 DDX3XO00571 662 aaKnown RBP eCLIP28.72■■■□□ 2.194e-7■■□□□ 14.2
CUEDC1-201ENST00000360238 EVI5O60447 810 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 CLSTN1O94985 981 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 P4HBP07237 508 aaKnown RBP28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 CAPN2P17655 700 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 PADI6Q6TGC4 694 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 PRPF38AQ8NAV1 312 aaKnown RBP28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 TPCN2Q8NHX9 752 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 LMBR1Q8WVP7 490 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 CLEC4DQ8WXI8 215 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 COL20A1Q9P218 1284 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 RFX1P22670 979 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 NOP2P46087 812 aaKnown RBP28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 NPEPPSP55786 919 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 TNNC1P63316 161 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 MRPS25P82663 173 aaKnown RBP28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 ZSCAN26Q16670 478 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 TMEM174Q8WUU8 243 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 LPAR1Q92633 364 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 HOOK2Q96ED9 719 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 HINFPQ9BQA5 517 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 TMEM59LQ9UK28 342 aa28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 DBR1Q9UK59 544 aaKnown RBP28.72■■■□□ 2.19
CUEDC1-201ENST00000360238 BFSP1Q12934 665 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 NFIBO00712 420 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 HEXIM1O94992 359 aaKnown RBP28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 LMNB1P20700 586 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 MYL7Q01449 175 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 CBWD6Q4V339 395 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 CBWD3Q5JTY5 395 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 CBWD5Q5RIA9 395 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 PCNX4Q63HM2 1172 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 LEKR1Q6ZMV7 388 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 SLFN11Q7Z7L1 901 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 SYCP3Q8IZU3 236 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 SLC30A5Q8TAD4 765 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 OLIG1Q8TAK6 271 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 INTS2Q9H0H0 1204 aaKnown RBP28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 APEX2Q9UBZ4 518 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 DNAJC12Q9UKB3 198 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 UBIAD1Q9Y5Z9 338 aa28.71■■■□□ 2.19
CUEDC1-201ENST00000360238 K7ENM7 598 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 DDX39AO00148 427 aaKnown RBP28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 KCNK3O14649 394 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 DHX15O43143 795 aaKnown RBP28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 RPS6KA5O75582 802 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 CCDC172P0C7W6 258 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 SYCE1Q8N0S2 351 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 ACTRT1Q8TDG2 376 aa28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 MAP3K20Q9NYL2 800 aaKnown RBP28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 LARSQ9P2J5 1176 aaKnown RBP28.7■■■□□ 2.19
CUEDC1-201ENST00000360238 WNT10BO00744 389 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 GLI1P08151 1106 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 PAK2Q13177 524 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 DRAP1Q14919 205 aaPredicted RBP28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 ALS2CLQ60I27 953 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 IL31RAQ8NI17 732 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 RIN2Q8WYP3 895 aaPredicted RBP28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 TMEM206Q9H813 350 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 AGO4Q9HCK5 861 aaKnown RBP28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 NCANO14594 1321 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 EXOC3O60645 756 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 KCNA3P22001 575 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 TKFCQ3LXA3 575 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 SAMD3Q8N6K7 520 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 LNX1Q8TBB1 728 aaPredicted RBP28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 U2AF1L4Q8WU68 220 aaKnown RBP28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 KRT12Q99456 494 aa28.69■■■□□ 2.18
CUEDC1-201ENST00000360238 PHF20L1A8MW92 1017 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 LYPLA2O95372 231 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 TRIM49P0CI25 452 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 TRIM49CP0CI26 452 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 EN1Q05925 392 aaPredicted RBP28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 SH3GL2Q99962 352 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 SYT11Q9BT88 431 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 GPR88Q9GZN0 384 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 ZHX2Q9Y6X8 837 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 ZBTB48P10074 688 aaPredicted RBP28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 C12orf56Q8IXR9 622 aa28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 CALR3Q96L12 384 aaKnown RBP28.68■■■□□ 2.18
CUEDC1-201ENST00000360238 DPEP1P16444 411 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 ITGB3BPQ13352 177 aaPredicted RBP28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 NBPF9Q3BBW0 867 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 KIAA1683Q9H0B3 1180 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 SUCLA2Q9P2R7 463 aaPredicted RBP28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 RARRES1P49788 294 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 GUCY2DQ02846 1103 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 INTS8Q75QN2 995 aaKnown RBP28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 SLC38A10Q9HBR0 1119 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 EPB41L5Q9HCM4 733 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 GINM1Q9NU53 330 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 CWC15Q9P013 229 aaKnown RBP28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 PKD2L1Q9P0L9 805 aa28.67■■■□□ 2.18
CUEDC1-201ENST00000360238 STXBP5LQ9Y2K9 1186 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms