RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PYGBP11216 843 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 ATP1A3P13637 1013 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 COPS2P61201 443 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 ZNF699Q32M78 642 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 ELMOD1Q8N336 334 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 NEUROG2Q9H2A3 272 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 CTIFO43310 598 aaKnown RBP19.63■□□□□ 0.73
SHANK1-202ENST00000359082 KRT37O76014 449 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 RESP18Q5W5W9 173 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 ASNSD1Q9NWL6 643 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 JAK3P52333 1124 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 MTMR1Q13613 665 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 BEND6Q5SZJ8 279 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-202ENST00000359082 FAM83BQ5T0W9 1011 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 FAM47EQ6ZV65 393 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 NR1H4Q96RI1 486 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-202ENST00000359082 TMEM60Q9H2L4 133 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 CEP70Q8NHQ1 597 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 HPCAL4Q9UM19 191 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 IFNAR1P17181 557 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 SSTR3P32745 418 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 FLOT2Q14254 428 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 LBRQ14739 615 aaKnown RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 SRP68Q9UHB9 627 aaKnown RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 TTC7AQ9ULT0 858 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 NLRP10Q86W26 655 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 KIFC3Q9BVG8 833 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 PYGLP06737 847 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 AFG1LQ8WV93 481 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 FAM213AQ9BRX8 229 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 RAVER2Q9HCJ3 691 aaKnown RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 UBE4BO95155 1302 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 FSCBQ5H9T9 825 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 SLC10A4Q96EP9 437 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 NPHP4O75161 1426 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 PODXLO00592 558 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 PRELPP51888 382 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 SFR1Q86XK3 245 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 RAPGEF5Q92565 580 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 SH3GLB2Q9NR46 395 aa19.62■□□□□ 0.73
SHANK1-202ENST00000359082 AFF4Q9UHB7 1163 aaKnown RBP19.62■□□□□ 0.73
SHANK1-202ENST00000359082 AP1B1Q10567 949 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 TMEM270Q6UE05 265 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 WDR75Q8IWA0 830 aaKnown RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 CEP72Q9P209 647 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 CACNB3P54284 484 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 POU5F1BQ06416 359 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 RBM41Q96IZ5 413 aaKnown RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 POTEMA6NI47 508 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 CASP1P29466 404 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 GCLMP48507 274 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 LZICQ8WZA0 190 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 MLXIPLQ9NP71 852 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 M0QYV0 167 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 IFNA8P32881 189 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 DCAF4L1Q3SXM0 396 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 ZC3H12BQ5HYM0 836 aaKnown RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 C16orf87Q6PH81 154 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 KPNA7A9QM74 516 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 SLC16A4O15374 487 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 RECQLP46063 649 aaPredicted RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 RASGRF1Q13972 1273 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 DCAF4Q8WV16 495 aa19.61■□□□□ 0.73
SHANK1-202ENST00000359082 WARS2Q9UGM6 360 aaKnown RBP19.61■□□□□ 0.73
SHANK1-202ENST00000359082 E5RI56 91 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 CLDN3O15551 220 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 CYP2D6P10635 497 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 NME3Q13232 169 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 C1orf146Q5VVC0 180 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 NUP85Q9BW27 656 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 NEDD4P46934 1319 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 LMNAP02545 664 aaKnown RBP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 NFKBIAP25963 317 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 ZNF568Q3ZCX4 644 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 PRDM5Q9NQX1 630 aaPredicted RBP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 LRRC53A6NM62 1247 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 KCNV2Q8TDN2 545 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 SCG3Q8WXD2 468 aaKnown RBP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 POLD4Q9HCU8 107 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 CCDC151A5D8V7 595 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 GH2P01242 217 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 TNFAIP2Q03169 654 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 ARID5BQ14865 1188 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 DALRD3Q5D0E6 543 aaKnown RBP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 RC3H1Q5TC82 1133 aaKnown RBP19.6■□□□□ 0.73
SHANK1-202ENST00000359082 KRT39Q6A163 491 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 RAD54LQ92698 747 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 ING2Q9H160 280 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 SYNGAP1Q96PV0 1343 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 DENND3A2RUS2 1198 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 PDCLQ13371 301 aa19.6■□□□□ 0.73
SHANK1-202ENST00000359082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms