RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 MKNK1Q9BUB5 465 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 AGPAT3Q9NRZ7 376 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 SUCLA2Q9P2R7 463 aaPredicted RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 FRMD4BQ9Y2L6 1034 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 UBE4BO95155 1302 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 GOLGA6L10A6NI86 522 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 CCDC188H7C350 402 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ENTPD3O75355 529 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ZBTB48P10074 688 aaPredicted RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 LMNB1P20700 586 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ABCB4P21439 1286 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 MYL7Q01449 175 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 KCTD19Q17RG1 926 aaPredicted RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 KIAA1755Q5JYT7 1200 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 KDM7AQ6ZMT4 941 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 NT5DC3Q86UY8 548 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFX3-202ENST00000358730 SLC5A5Q92911 643 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ATP6V1G3Q96LB4 118 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 RNPC3Q96LT9 517 aaKnown RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 FAM107BQ9H098 131 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 CENPHQ9H3R5 247 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFX3-202ENST00000358730 OSGEPQ9NPF4 335 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 SEL1LQ9UBV2 794 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 AMACRQ9UHK6 382 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 STXBP5LQ9Y2K9 1186 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 A6NNZ2 444 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ITGA4P13612 1032 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 TRAF1Q13077 416 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 NFIL3Q16649 462 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 TUBB8Q3ZCM7 444 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 CC2D2BQ6DHV5 1058 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ZNF720Q7Z2F6 126 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 EIF1ADQ8N9N8 165 aaKnown RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 OLIG1Q8TAK6 271 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 ACER1Q8TDN7 264 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 CTNNBL1Q8WYA6 563 aaPredicted RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 PRMT6Q96LA8 375 aaPredicted RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 STK33Q9BYT3 514 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 INTS2Q9H0H0 1204 aaKnown RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 WRAP73Q9P2S5 460 aaPredicted RBP9.34□□□□□ -0.91
RFX3-202ENST00000358730 NCANO14594 1321 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 IGSF9BQ9UPX0 1349 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 LOXHD1Q8IVV2 1947 aa9.34□□□□□ -0.91
RFX3-202ENST00000358730 HMGB1P1B2RPK0 211 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 BUB1BO60566 1050 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 HSD17B3P37058 310 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 ZNF131P52739 623 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 GUCY1A3Q02108 690 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 CEP55Q53EZ4 464 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 RASGEF1CQ8N431 466 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SLC30A5Q8TAD4 765 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 LRRC45Q96CN5 670 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 NACC1Q96RE7 527 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 LXNQ9BS40 222 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 ZNF577Q9BSK1 485 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 NEUROG2Q9H2A3 272 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 UNC45AQ9H3U1 944 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 EHMT1Q9H9B1 1298 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 APEX2Q9UBZ4 518 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 AMFRQ9UKV5 643 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 ODF2LQ9ULJ1 636 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SAMM50Q9Y512 469 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 TCP10L2B9ZVM9 353 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 EXOC3O60645 756 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 LRRN2O75325 713 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 NPEPPSP55786 919 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 PRPF4BQ13523 1007 aaKnown RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 ZYXQ15942 572 aaKnown RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 ARHGAP44Q17R89 818 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SYCP3Q8IZU3 236 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 BANK1Q8NDB2 785 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SLC35G2Q8TBE7 412 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 HES6Q96HZ4 224 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 WDR11Q9BZH6 1224 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 GPR88Q9GZN0 384 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 FAM169AQ9Y6X4 670 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 COL2A1P02458 1487 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 ARHGEF35A5YM69 484 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 TTI1O43156 1089 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 DAPK3O43293 454 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 FGGP02679 453 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 TMEM253P0C7T8 217 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 MYZAPP0CAP1 466 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 LSP1P33241 339 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 CTNNA1P35221 906 aaKnown RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 BFSP1Q12934 665 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms