RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 NLRP7Q8WX94 980 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 NACA2Q9H009 215 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 RNF146Q9NTX7 359 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 SNX12Q9UMY4 172 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 ZHX2Q9Y6X8 837 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 RIMS1Q86UR5 1692 aaKnown RBP15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 GRID2IPA4D2P6 1211 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 CHRNA5P30532 468 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 KRT76Q01546 638 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 MCPH1Q8NEM0 835 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 PPP4R1Q8TF05 950 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 HEMGNQ9BXL5 484 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 NDUFB10O96000 172 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 OSBPP22059 807 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 SPATA24Q86W54 205 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 LDHDQ86WU2 507 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 JMJD4Q9H9V9 463 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 ADAM22Q9P0K1 906 aa15.74■□□□□ 0.11
SLC6A20-202ENST00000358525 PDXKO00764 312 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 CTIFO43310 598 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 OR6B2Q6IFH4 312 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 THNSL1Q8IYQ7 743 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 LRRC1Q9BTT6 524 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 EDEM3Q9BZQ6 932 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 ACTN1P12814 892 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 CFAP57Q96MR6 1250 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 PODXLO00592 558 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SOX5P35711 763 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 NTRK3Q16288 839 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 CEP55Q53EZ4 464 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 ARHGEF18Q6ZSZ5 1173 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 CCDC117Q8IWD4 279 aaPredicted RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 NUP85Q9BW27 656 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 ZWILCHQ9H900 591 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 CNTNAP4Q9C0A0 1308 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 A0A087WUV0 522 aaPredicted RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 EXOC1LA0A1B0GW35 172 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 AFAP1L2Q8N4X5 818 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 ZNF564Q8TBZ8 553 aaPredicted RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 HERC5Q9UII4 1024 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SPP2Q13103 211 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 SNCBQ16143 134 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 FAM133BQ5BKY9 247 aaKnown RBP15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 EXOC8Q8IYI6 725 aa15.73■□□□□ 0.11
SLC6A20-202ENST00000358525 MSH2P43246 934 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 CCNA1P78396 465 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 PDZD4Q76G19 769 aaPredicted RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 ERICH1Q86X53 443 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 HEXIM2Q96MH2 286 aaKnown RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 SCINQ9Y6U3 715 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 GPR75-ASB3A0A0A6YYF3 556 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 TCRBV5S4A2TA0A5A2 114 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 SAT1P21673 171 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 PPM1FP49593 454 aaPredicted RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 EPHA7Q15375 998 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 TMEM270Q6UE05 265 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 BARGINQ6ZT62 677 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 GABPAQ06546 454 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 ADCY2Q08462 1091 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 STXBP2Q15833 593 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 NSUN6Q8TEA1 469 aaKnown RBP15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 COG1Q8WTW3 980 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 TFR2Q9UP52 801 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 REXO1L1PQ8IX06 675 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 SH2D3AQ9BRG2 576 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 C11orf70Q9BRQ4 267 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
SLC6A20-202ENST00000358525 TARSL2A2RTX5 802 aaKnown RBP15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 ARHGAP42A6NI28 874 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 PSMC5P62195 406 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 CLDN3O15551 220 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 MYBP10242 640 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 SEC23AQ15436 765 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 NYAP2Q9P242 653 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 PALM3A6NDB9 673 aaPredicted RBP15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 SFNP31947 248 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 SLC18A3Q16572 532 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 STRIP1Q5VSL9 837 aa15.71■□□□□ 0.11
SLC6A20-202ENST00000358525 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms