RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ASCC2Q9H1I8 757 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PPCSQ9HAB8 311 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CYP4F11Q9HBI6 524 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CCDC195A0A1B0GUA6 201 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 E7ENQ6 273 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PTPREP23469 700 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 DTX3LQ8TDB6 740 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PKD2L2Q9NZM6 624 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 NDUFA13Q9P0J0 144 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ARHGEF40Q8TER5 1519 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 USP17L21D6R901 530 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CAPN9O14815 690 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 LLGL1Q15334 1064 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 TMTC4Q5T4D3 741 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ERP27Q96DN0 273 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CALN1Q9BXU9 219 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 NPHS2Q9NP85 383 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 KIF17Q9P2E2 1029 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 E2F6O75461 281 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MRPL28Q13084 256 aaKnown RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PFASO15067 1338 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 NCK2O43639 380 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CHEK2O96017 543 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 GNAT1P11488 350 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MXD3Q9BW11 206 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 SH3GLB2Q9NR46 395 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 SUN2Q9UH99 717 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 HSPA13P48723 471 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CYTH1Q15438 398 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 TRIM60Q495X7 471 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ARHGAP22Q7Z5H3 698 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 XPO6Q96QU8 1125 aaKnown RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PARVGQ9HBI0 331 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 GPR108Q9NPR9 543 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ADGRL3Q9HAR2 1447 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ZNF185O15231 689 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MYCLP12524 364 aaPredicted RBP9.34□□□□□ -0.91
COL6A6-201ENST00000358511 PRCPP42785 496 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 CARD9Q9H257 536 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 TMEM206Q9H813 350 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 S100A5P33763 92 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ALCAMQ13740 583 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 CASP10Q92851 521 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 STAT4Q14765 748 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 TEKT2Q9UIF3 430 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 BLOC1S6Q9UL45 172 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 GDAQ9Y2T3 454 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 KIF2BQ8N4N8 673 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MCUQ8NE86 351 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 HESX1Q9UBX0 185 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 CDHR2Q9BYE9 1310 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 SMARCA1P28370 1054 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 KDSRQ06136 332 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 NLRX1Q86UT6 975 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MED7O43513 233 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ZRANB2O95218 330 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL6A6-201ENST00000358511 TAC1P20366 129 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MXI1P50539 228 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 SYDE1Q6ZW31 735 aaPredicted RBP9.34□□□□□ -0.91
COL6A6-201ENST00000358511 B4GALNT2Q8NHY0 566 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ANAPC7Q9UJX3 599 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 FIS1Q9Y3D6 152 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MADDQ8WXG6 1647 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 FRMPD2Q68DX3 1309 aaPredicted RBP9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ZBED1O96006 694 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 ZCWPW2Q504Y3 356 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 FAM83BQ5T0W9 1011 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 TERB1Q8NA31 727 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 EME1Q96AY2 570 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 DACH2Q96NX9 599 aa9.34□□□□□ -0.91
COL6A6-201ENST00000358511 MAGI3Q5TCQ9 1506 aa9.34□□□□□ -0.92
COL6A6-201ENST00000358511 PMS1P54277 932 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RCN1Q15293 331 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 LRRC41Q15345 812 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TRIM16LQ309B1 348 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 SPOUT1Q5T280 376 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 OPTNQ96CV9 577 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RNPC3Q96LT9 517 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TSSK1BQ9BXA7 367 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GIMAP4Q9NUV9 329 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TLR7Q9NYK1 1049 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TSPOAP1O95153 1857 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TMEM191BP0C7N4 346 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RIN2Q8WYP3 895 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms