RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 NT5C1BQ96P26 610 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 RERGLQ9H628 205 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 ZC3H7BQ9UGR2 993 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 PRRG1O14668 218 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CHRNDQ07001 517 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CBFBQ13951 182 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 IL17REQ8NFR9 667 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 TBC1D22AQ8WUA7 517 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 JADE3Q92613 823 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 UPF3AQ9H1J1 476 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 RSPH9Q9H1X1 276 aaPredicted RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 ZBED1O96006 694 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 AARSP49588 968 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■■■ 36.1
CHD3-202ENST00000358181 DYNLL1P63167 89 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 TAF1BQ53T94 588 aaPredicted RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 SGO2Q562F6 1265 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 PASKQ96RG2 1323 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 GNAT1P11488 350 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 YWHAZP63104 245 aaKnown RBP10.42□□□□□ -0.74
CHD3-202ENST00000358181 KCTD16Q68DU8 428 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 SMIM5Q71RC9 77 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 UNC45AQ9H3U1 944 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 SERTAD1Q9UHV2 236 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 SLC25A13Q9UJS0 675 aa10.42□□□□□ -0.74
CHD3-202ENST00000358181 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 SPATS2Q86XZ4 545 aaKnown RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 MUC3BQ9H195 1237 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KIAA1024Q9UPX6 916 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 MZF1P28698 734 aaPredicted RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 IL9RQ01113 521 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 OCA2Q04671 838 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 RBBP4Q09028 425 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 MTBPQ96DY7 904 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 UBE2TQ9NPD8 197 aaPredicted RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 LZTS1Q9Y250 596 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 HEY1Q9Y5J3 304 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 MYO1FO00160 1098 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 RASSF7Q02833 373 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 ARSJQ5FYB0 599 aaPredicted RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 LUZP2Q86TE4 346 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 CLIC6Q96NY7 704 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 ATP6V0A4Q9HBG4 840 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 hCG_2014768A0A024R1R8 64 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 ZNF202O95125 648 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 IGFBP4P22692 258 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 HPCAP84074 193 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KRT40Q6A162 431 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 SPATA18Q8TC71 538 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 PARVGQ9HBI0 331 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 A0A087WWV3 80 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 GOLGA8RI6L899 631 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 PHKG2P15735 406 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 ZNF827Q17R98 1081 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 EXOC3L4Q17RC7 722 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 RGS9BPQ6ZS82 235 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 HDDC2Q7Z4H3 204 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 THNSL1Q8IYQ7 743 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 KRT78Q8N1N4 520 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 CCNYL1Q8N7R7 359 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 EIF2AK4Q9P2K8 1649 aaKnown RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 SLC8A1P32418 973 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 COPB2P35606 906 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 USP14P54578 494 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 MED21Q13503 144 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 TRIM11Q96F44 468 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 NGRNQ9NPE2 291 aaKnown RBP10.41□□□□□ -0.74
CHD3-202ENST00000358181 HOMER3Q9NSC5 361 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 RNF181Q9P0P0 153 aa10.41□□□□□ -0.74
CHD3-202ENST00000358181 NFICP08651 508 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 PSMA2P25787 234 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 NEK2P51955 445 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 HDLBPQ00341 1268 aaKnown RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 MORC3Q14149 939 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 SRRM1Q8IYB3 904 aaKnown RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 KLHL29Q96CT2 875 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 PPP1R13BQ96KQ4 1090 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ZNF229Q9UJW7 825 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 OAS2P29728 719 aaKnown RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 PHKA1P46020 1223 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ME3Q16798 604 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ARHGAP17Q68EM7 881 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 KBTBD3Q8NAB2 608 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 PLEKHA8Q96JA3 519 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 MSTO1Q9BUK6 570 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ADA2Q9NZK5 511 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 AP1G2O75843 785 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms