RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FAM8A1Q9UBU6 413 aa15.86■□□□□ 0.13
CHD4-201ENST00000357008 GRAMD4Q6IC98 578 aa15.86■□□□□ 0.13
CHD4-201ENST00000357008 ZNF564Q8TBZ8 553 aaPredicted RBP15.86■□□□□ 0.13
CHD4-201ENST00000357008 SLC24A3Q9HC58 644 aa15.86■□□□□ 0.13
CHD4-201ENST00000357008 MLXIPLQ9NP71 852 aa15.86■□□□□ 0.13
CHD4-201ENST00000357008 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
CHD4-201ENST00000357008 NOC2LQ9Y3T9 749 aaKnown RBP15.86■□□□□ 0.13
CHD4-201ENST00000357008 GGPS1O95749 300 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 CALB1P05937 261 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 LY9Q9HBG7 655 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 DCTN4Q9UJW0 460 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 TRPC5Q9UL62 973 aaPredicted RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 MEFVO15553 781 aaPredicted RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 PPP1R37O75864 691 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 CYP2C19P33261 490 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 KNOP1Q1ED39 458 aaKnown RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 SHC4Q6S5L8 630 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 ANO5Q75V66 913 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 NDE1Q9NXR1 346 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 ZNF18P17022 549 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 ZNF211Q13398 564 aaPredicted RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 KIF19Q2TAC6 998 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 OLFM3Q96PB7 478 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 FAM167BQ9BTA0 163 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 WNT8AQ9H1J5 351 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 CLRN2A0PK11 232 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 RYBPQ8N488 228 aaPredicted RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 PMLP29590 882 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 RAD23BP54727 409 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 KIF22Q14807 665 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 CDO1Q16878 200 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 CAPRIN2Q6IMN6 1127 aaKnown RBP15.85■□□□□ 0.13
CHD4-201ENST00000357008 RGS9BPQ6ZS82 235 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 BTBD6Q96KE9 485 aa15.85■□□□□ 0.13
CHD4-201ENST00000357008 OSTNP61366 133 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 PIGOQ8TEQ8 1089 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 CYP26B1Q9NR63 512 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 PAMP19021 973 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 YWHAHQ04917 246 aaPredicted RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 FAM161BQ96MY7 647 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 NUP85Q9BW27 656 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 OSBPL1AQ9BXW6 950 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 STRIP2Q9ULQ0 834 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 PFASO15067 1338 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 ARHGAP10A1A4S6 786 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 GCLMP48507 274 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 TRIM59Q8IWR1 403 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 SNF8Q96H20 258 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 NOP14P78316 857 aaKnown RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 CCDC137Q6PK04 289 aaKnown RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 ZBTB18Q99592 522 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 BSDC1Q9NW68 430 aaPredicted RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 ASNSD1Q9NWL6 643 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 KIF1CO43896 1103 aaKnown RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 RFX1P22670 979 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 XPAP23025 273 aaPredicted RBP15.84■□□□□ 0.13
CHD4-201ENST00000357008 COPS2P61201 443 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 KCNF1Q9H3M0 494 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 SNX12Q9UMY4 172 aa15.84■□□□□ 0.13
CHD4-201ENST00000357008 UBN2Q6ZU65 1347 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 ZBTB24O43167 697 aaPredicted RBP15.83■□□□□ 0.13
CHD4-201ENST00000357008 TSGA10IPQ3SY00 556 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 TMEM259Q4ZIN3 620 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 PPP6R3Q5H9R7 873 aaPredicted RBP15.83■□□□□ 0.13
CHD4-201ENST00000357008 FOXP4Q8IVH2 680 aaPredicted RBP15.83■□□□□ 0.13
CHD4-201ENST00000357008 PSPC1Q8WXF1 523 aaKnown RBP15.83■□□□□ 0.13
CHD4-201ENST00000357008 FAM20AQ96MK3 541 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 TRPV6Q9H1D0 765 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 USP21Q9UK80 565 aa15.83■□□□□ 0.13
CHD4-201ENST00000357008 ARHGEF37A1IGU5 675 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 ZBTB5O15062 677 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 JAK3P52333 1124 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 EPN3Q9H201 632 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 PCDHA6Q9UN73 950 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 PCDHA8Q9Y5H6 950 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 E9PMD0 336 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 CDC27P30260 824 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 MDH1P40925 334 aaKnown RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 EPHB1P54762 984 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 ALX1Q15699 326 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 PPP1R18Q6NYC8 613 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 PDXDC1Q6P996 788 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 ARMC2Q8NEN0 867 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 DCAF4Q8WV16 495 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 RFFLQ8WZ73 363 aa15.83■□□□□ 0.12
CHD4-201ENST00000357008 ZMAT2Q96NC0 199 aaKnown RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 WARS2Q9UGM6 360 aaKnown RBP15.83■□□□□ 0.12
CHD4-201ENST00000357008 ATP8B3O60423 1300 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms