RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 SCTRP47872 440 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PPP2R5BQ15173 497 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 KCTD21Q4G0X4 260 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 NEK8Q86SG6 692 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 MYLK4Q86YV6 388 aaPredicted RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 EXT2Q93063 718 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 SERPINI1Q99574 410 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 SLC13A1Q9BZW2 595 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 USP17L21D6R901 530 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PRKAB2O43741 272 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ANO5Q75V66 913 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 C1orf54Q8WWF1 131 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 RBM12Q9NTZ6 932 aaKnown RBP8.4□□□□□ -1.06
VANGL1-202ENST00000355485 PCDHA12Q9UN75 941 aa8.4□□□□□ -1.06
VANGL1-202ENST00000355485 ARHGAP10A1A4S6 786 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 NEURL1BA8MQ27 555 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 SASH3O75995 380 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 STX1BP61266 288 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 NBPF15Q8N660 670 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 POLR3CQ9BUI4 534 aaPredicted RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 FOXP1Q9H334 677 aaPredicted RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 RPS6P62753 249 aaKnown RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 PRAMEP78395 509 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 SHC4Q6S5L8 630 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 LRRC47Q8N1G4 583 aaKnown RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 SIKE1Q9BRV8 207 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 SATB2Q9UPW6 733 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 PCDHB4Q9Y5E5 795 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 ZW10O43264 779 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 LGR5O75473 907 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 NNMTP40261 264 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 UBE3AQ05086 875 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 APOA5Q6Q788 366 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 BZW1Q7L1Q6 419 aaKnown RBP8.4□□□□□ -1.07
VANGL1-202ENST00000355485 ARHGAP22Q7Z5H3 698 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 HSPH1Q92598 858 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 ABHD8Q96I13 439 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 DENND2AQ9ULE3 1009 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 ARL2BPQ9Y2Y0 163 aa8.4□□□□□ -1.07
VANGL1-202ENST00000355485 ZNF197O14709 1029 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 HSPA4LO95757 839 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 NQO1P15559 274 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PLCG1P19174 1290 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 CCNE1P24864 410 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 COPB2P35606 906 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 B4GALNT2Q8NHY0 566 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ADA2Q9NZK5 511 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 GOLGA8IPA6NC78 632 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 GOLGA8JA6NMD2 632 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 IPO5O00410 1097 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 COPEO14579 308 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 EZH2Q15910 746 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PHKG1Q16816 387 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 TRIM42Q8IWZ5 723 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 FGFR1OP2Q9NVK5 253 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 GCNT4Q9P109 453 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 TARSL2A2RTX5 802 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 WBP4O75554 376 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ATP2B4P23634 1241 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PIK3CAP42336 1068 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 TTC30BQ8N4P2 665 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 TBC1D19Q8N5T2 526 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ERP27Q96DN0 273 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 MAP3K20Q9NYL2 800 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ARHGEF9O43307 516 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 GYS1P13807 737 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 THOC5Q13769 683 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ATG16L1Q676U5 607 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 USP15Q9Y4E8 981 aaPredicted RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 POTEB3A0JP26 581 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 TTI1O43156 1089 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 RAD51CO43502 376 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 DAB1O75553 588 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ALKBH5Q6P6C2 394 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 POTEBQ6S5H4 581 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 NDEL1Q9GZM8 345 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PRAMEF22A3QJZ6 481 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 ERN1O75460 977 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 KIF19Q2TAC6 998 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 LARP4BQ92615 738 aaKnown RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 PRCCQ92733 491 aaPredicted RBP8.39□□□□□ -1.07
VANGL1-202ENST00000355485 EFHD1Q9BUP0 239 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 HAO1Q9UJM8 370 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 A2MP01023 1474 aa8.39□□□□□ -1.07
VANGL1-202ENST00000355485 SH2B2O14492 632 aaPredicted RBP8.38□□□□□ -1.07
VANGL1-202ENST00000355485 ATP9AO75110 1047 aa8.38□□□□□ -1.07
VANGL1-202ENST00000355485 CAPZA2P47755 286 aa8.38□□□□□ -1.07
VANGL1-202ENST00000355485 SPOPLQ6IQ16 392 aa8.38□□□□□ -1.07
VANGL1-202ENST00000355485 REXO1Q8N1G1 1221 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms