RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 CCDC65Q8IXS2 484 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 LENG9Q96B70 501 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
SNU13-202ENST00000355257 KATNBL1Q9H079 304 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 PANK4Q9NVE7 773 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 FHOD1Q9Y613 1164 aa12.18□□□□□ -0.46
SNU13-202ENST00000355257 TRIM43BA6NCK2 446 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 PLA2G6O60733 806 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 ZBED4O75132 1171 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 LCA5LO95447 670 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 TUBBP07437 444 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 RARBP10826 455 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 IDEP14735 1019 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
SNU13-202ENST00000355257 RPA1P27694 616 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 FAM193AP78312 1265 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 TMCO3Q6UWJ1 677 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 KLHDC9Q8NEP7 349 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 ERMNQ8TAM6 284 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
SNU13-202ENST00000355257 NHEJ1Q9H9Q4 299 aaPredicted RBP12.17□□□□□ -0.46
SNU13-202ENST00000355257 RAB21Q9UL25 225 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 KIAA1024Q9UPX6 916 aa12.17□□□□□ -0.46
SNU13-202ENST00000355257 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 PES1O00541 588 aaKnown RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 OPLAHO14841 1288 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNU13-202ENST00000355257 MED24O75448 989 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 ITGB8P26012 769 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 KLK7P49862 253 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 GABPB1Q06547 395 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 BRD3Q15059 726 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 ARSHQ5FYA8 562 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 PAPD7Q5XG87 772 aaKnown RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 TRAPPC11Q7Z392 1133 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 SYT2Q8N9I0 419 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 ARID3AQ99856 593 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 COL6A3P12111 3177 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 CCDC151A5D8V7 595 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 MYADML2A6NDP7 307 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 E9PMD0 336 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 KRT86O43790 486 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 PNMA6AP0CW24 399 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 FDX1P10109 184 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 STAT2P52630 851 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 TLE2Q04725 743 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 RNF180Q86T96 592 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 BAP1Q92560 729 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 GJA10Q969M2 543 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 POLR3CQ9BUI4 534 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 PARD6BQ9BYG5 372 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 NUCKS1Q9H1E3 243 aaKnown RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
SNU13-202ENST00000355257 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 ASTN1O14525 1302 aa12.16□□□□□ -0.46
SNU13-202ENST00000355257 SSU72P8A0A1W2PR75 194 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 FAM86B1E9PN63 330 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 FAM86B2P0C5J1 330 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 CST5P28325 142 aaPredicted RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 VAV2P52735 878 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 NKX3-2P78367 333 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 ACVR2BQ13705 512 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 SHHQ15465 462 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms