RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TESPA1A2RU30 521 aaPredicted RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 PDZK1P1A8MUH7 402 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 SMARCA1P28370 1054 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NFIL3Q16649 462 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NDUFAF2Q8N183 169 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 TINF2Q9BSI4 451 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 KRT84Q9NSB2 600 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 CFAP73A6NFT4 308 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ZNF233A6NK53 670 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 C5orf58C9J3I9 102 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 SYNCRIPO60506 623 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ZBED4O75132 1171 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 HAUS5O94927 633 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 BTN3A2P78410 334 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 KSR2Q6VAB6 950 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 EML4Q9HC35 981 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 LRRIQ4A6NIV6 560 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ITGA3P26006 1051 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 PLOD1Q02809 727 aaPredicted RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 COG2Q14746 738 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 Q3C1V9 767 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ALFQ53S48 1182 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NESP48681 1621 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ZBED1O96006 694 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ENO1P06733 434 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 USP39Q53GS9 565 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NANOGNBQ7Z5D8 188 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 STKLD1Q8NE28 680 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 SERPINB4P48594 390 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 A0A1W2PRG6 482 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 TPD52L2O43399 206 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 SCGNO76038 276 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 GPR1P46091 355 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 CDO1Q16878 200 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 C8orf34Q49A92 452 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ARMC3Q5W041 872 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 CCNYL1Q8N7R7 359 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 VPS37AQ8NEZ2 397 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 LARP4BQ92615 738 aaKnown RBP8.54□□□□□ -1.04
SCN8A-201ENST00000354534 FTCDO95954 541 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 RALBP11234 206 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ANKS3Q6ZW76 656 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 RGS20O76081 388 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 S100A6P06703 90 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NCALDP61601 193 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 ZSWIM7Q19AV6 140 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 TFCP2L1Q9NZI6 479 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 NFU1Q9UMS0 254 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 EMILIN1Q9Y6C2 1016 aa8.54□□□□□ -1.04
SCN8A-201ENST00000354534 PIK3R2O00459 728 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 PRPSAP2O60256 369 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 COBLO75128 1261 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 MYL1P05976 194 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 SH3KBP1Q96B97 665 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ZBTB10Q96DT7 871 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 CEP95Q96GE4 821 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 FAM96AQ9H5X1 160 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 SAYSD1Q9NPB0 183 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 SERPIND1P05546 499 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 MAPKAPK2P49137 400 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 MFAP3P55082 362 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ARPP19P56211 112 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 FCHO2Q0JRZ9 810 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 UBASH3BQ8TF42 649 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 TRIM11Q96F44 468 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 PARD6BQ9BYG5 372 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 KCNJ14Q9UNX9 436 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 GMNCA6NCL1 334 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 WASLO00401 505 aaPredicted RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 CTIFO43310 598 aaKnown RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 TOM1O60784 492 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 UBTFL6P0CB48 400 aaPredicted RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 TTC6Q86TZ1 520 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 DDI1Q8WTU0 396 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 MBD4O95243 580 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 OLFML1Q6UWY5 402 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 METTL23Q86XA0 190 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 PDIK1LQ8N165 341 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 SLC39A2Q9NP94 309 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 VPS54Q9P1Q0 977 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 DTNAQ9Y4J8 743 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 PEG3Q9GZU2 1588 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 H7C1D1 291 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 DDX5P17844 614 aaKnown RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ALDH18A1P54886 795 aaKnown RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 ADAM9Q13443 819 aa8.53□□□□□ -1.04
SCN8A-201ENST00000354534 CCSAPQ6IQ19 270 aaPredicted RBP8.53□□□□□ -1.04
SCN8A-201ENST00000354534 LMBR1LQ6UX01 489 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms