RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 NKRFO15226 690 aaKnown RBP eCLIP22.59■■□□□ 1.21
TRIM4-202ENST00000354241 CLIC2O15247 247 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 TGFB1I1O43294 461 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 SMPD1P17405 629 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 SMTNP53814 917 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 NCKAP1LP55160 1127 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 CCL14Q16627 93 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 PRAMEF19Q5SWL8 479 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 HAUS6Q7Z4H7 955 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 SYCP3Q8IZU3 236 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 CCDC150Q8NCX0 1101 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 BBXQ8WY36 941 aaPredicted RBP22.59■■□□□ 1.21
TRIM4-202ENST00000354241 BSNDQ8WZ55 320 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 ZSWIM8A7E2V4 1837 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 GNA14O95837 355 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 NR3C1P04150 777 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 CTGFP29279 349 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 NPTX2P47972 431 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 TARBP2Q15633 366 aaKnown RBP22.59■■□□□ 1.21
TRIM4-202ENST00000354241 DUSP28Q4G0W2 176 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 SLC17A8Q8NDX2 589 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 PPTC7Q8NI37 304 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 AFG1LQ8WV93 481 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 SLC7A3Q8WY07 619 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 DHX33Q9H6R0 707 aaKnown RBP22.59■■□□□ 1.21
TRIM4-202ENST00000354241 C17orf75Q9HAS0 396 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 KMT5AQ9NQR1 393 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 CREBZFQ9NS37 354 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 GJD2Q9UKL4 321 aa22.59■■□□□ 1.21
TRIM4-202ENST00000354241 RASSF10A6NK89 507 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 RPL13P26373 211 aaKnown RBP22.58■■□□□ 1.21
TRIM4-202ENST00000354241 RFC5P40937 340 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 PLCB4Q15147 1175 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 MIIPQ5JXC2 388 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 IQSEC1Q6DN90 963 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 ARMCX5Q6P1M9 558 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 HS2ST1Q7LGA3 356 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 ATP8B4Q8TF62 1192 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 EMID1Q96A84 441 aaPredicted RBP22.58■■□□□ 1.21
TRIM4-202ENST00000354241 ACCSQ96QU6 501 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 CEP89Q96ST8 783 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 APBA2Q99767 749 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 GBP3Q9H0R5 595 aa22.58■■□□□ 1.21
TRIM4-202ENST00000354241 SFPQP23246 707 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRIM4-202ENST00000354241 DNM2P50570 870 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 TBX2Q13207 712 aaPredicted RBP22.57■■□□□ 1.2
TRIM4-202ENST00000354241 MAN2A1Q16706 1144 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 OR6J1Q8NGC5 347 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 TMEM143Q96AN5 459 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 IFT74Q96LB3 600 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 KIFC3Q9BVG8 833 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 ST6GALNAC4Q9H4F1 302 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 TMEM206Q9H813 350 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 TRPC6Q9Y210 931 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 CYP2C19P33261 490 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 SLC26A2P50443 739 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 FCGRTP55899 365 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 GTF2BQ00403 316 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 TNFAIP2Q03169 654 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 GOLGA8FQ08AF8 430 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 GOLGA8DPQ0D2H9 430 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 VWA3BQ502W6 1294 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 SPIRE2Q8WWL2 714 aa22.57■■□□□ 1.2
TRIM4-202ENST00000354241 ITIH6Q6UXX5 1313 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 LGALS2P05162 132 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 APLP1P51693 650 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 RTP1P59025 263 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 OLFML2BQ68BL8 750 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 AGPAT3Q9NRZ7 376 aa22.56■■□□□ 1.2
TRIM4-202ENST00000354241 YY1P25490 414 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 TBC1D8BQ0IIM8 1120 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 FKBP15Q5T1M5 1219 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 CEP135Q66GS9 1140 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 PPFIBP1Q86W92 1011 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 ZNF784Q8NCA9 323 aaPredicted RBP22.55■■□□□ 1.2
TRIM4-202ENST00000354241 TMEM161BQ8NDZ6 487 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 GOLGA5Q8TBA6 731 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 ARHGAP39Q9C0H5 1083 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 NDST4Q9H3R1 872 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 ERAP1Q9NZ08 941 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 PPME1Q9Y570 386 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 ADCY6O43306 1168 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 PSMC4P43686 418 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 MARSP56192 900 aaKnown RBP22.55■■□□□ 1.2
TRIM4-202ENST00000354241 NFIL3Q16649 462 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 PYCARDQ9ULZ3 195 aa22.55■■□□□ 1.2
TRIM4-202ENST00000354241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.55■■□□□ 1.21e-6■■■■□ 23.3
TRIM4-202ENST00000354241 A0A1W2PQC6 194 aa22.54■■□□□ 1.2
TRIM4-202ENST00000354241 DENND3A2RUS2 1198 aa22.54■■□□□ 1.2
TRIM4-202ENST00000354241 MAFO75444 373 aaPredicted RBP22.54■■□□□ 1.2
TRIM4-202ENST00000354241 ZNF286BP0CG31 522 aa22.54■■□□□ 1.2
TRIM4-202ENST00000354241 LACTBP83111 547 aaPredicted RBP22.54■■□□□ 1.2
TRIM4-202ENST00000354241 HVCN1Q96D96 273 aa22.54■■□□□ 1.2
TRIM4-202ENST00000354241 NTPCRQ9BSD7 190 aaKnown RBP22.54■■□□□ 1.2
TRIM4-202ENST00000354241 TBX20Q9UMR3 447 aa22.54■■□□□ 1.2
TRIM4-202ENST00000354241 HBP1O60381 514 aa22.53■■□□□ 1.2
TRIM4-202ENST00000354241 ZNF865P0CJ78 1059 aaPredicted RBP22.53■■□□□ 1.2
TRIM4-202ENST00000354241 EPB41P11171 864 aaKnown RBP22.53■■□□□ 1.2
TRIM4-202ENST00000354241 CASP4P49662 377 aa22.53■■□□□ 1.2
TRIM4-202ENST00000354241 CYP2J2P51589 502 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms