RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GPC3P51654 580 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 OPTNQ96CV9 577 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 NSRP1Q9H0G5 558 aaKnown RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 MAN1A1P33908 653 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 TRIP13Q15645 432 aaPredicted RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 PROM2Q8N271 834 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 ARFGAP2Q8N6H7 521 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 MAIP1Q8WWC4 291 aa14.79□□□□□ -0.04
SMC6-201ENST00000351948 GBA2Q9HCG7 927 aaPredicted RBP14.79□□□□□ -0.04
SMC6-201ENST00000351948 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 KRT1P04264 644 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 ABCD1P33897 745 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 CATSPER3Q86XQ3 398 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 GCOM2Q9BZD3 368 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 FAM217BQ9NTX9 383 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 FEZ2Q9UHY8 353 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 STAMBPO95630 424 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 ARP10275 920 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 SCN4BQ8IWT1 228 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 C11orf70Q9BRQ4 267 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 ABHD10Q9NUJ1 306 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 SURF1Q15526 300 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 ERICH1Q86X53 443 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 ZWILCHQ9H900 591 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 GOLGA6CA6NDK9 693 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 SGK1O00141 431 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 PRKCBP05771 671 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 GOLGA6DP0CG33 693 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 C2orf54Q08AI8 447 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
SMC6-201ENST00000351948 GNASQ5JWF2 1037 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 GOLGA6AQ9NYA3 693 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 SEL1LQ9UBV2 794 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMC6-201ENST00000351948 MAD1L1Q9Y6D9 718 aa14.78□□□□□ -0.04
SMC6-201ENST00000351948 CIITAP33076 1130 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 DPYDQ12882 1025 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 PALM2Q8IXS6 379 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 MAP3K14Q99558 947 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 AP1M1Q9BXS5 423 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 CDC23Q9UJX2 597 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 MED7O43513 233 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 OATP04181 439 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 SAT1P21673 171 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 CTNNA1P35221 906 aaKnown RBP14.77□□□□□ -0.04
SMC6-201ENST00000351948 C4orf50Q6ZRC1 276 aa14.77□□□□□ -0.04
SMC6-201ENST00000351948 DGAT1O75907 488 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 SLC4A1P02730 911 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 CLUL1Q15846 466 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 DENND2CQ68D51 928 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.05
SMC6-201ENST00000351948 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.05
SMC6-201ENST00000351948 KCNB2Q92953 911 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 ADAM22Q9P0K1 906 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.05
SMC6-201ENST00000351948 SALL1Q9NSC2 1324 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 RARBP10826 455 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 MAP7D3Q8IWC1 876 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 ANKRD42Q8N9B4 389 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 PANX2Q96RD6 677 aa14.77□□□□□ -0.05
SMC6-201ENST00000351948 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.05
SMC6-201ENST00000351948 SLC25A27O95847 323 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 TOB1P50616 345 aaPredicted RBP14.76□□□□□ -0.05
SMC6-201ENST00000351948 NTRK3Q16288 839 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 FAM117BQ6P1L5 589 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 CYP2W1Q8TAV3 490 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 EHD4Q9H223 541 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 GPRC5CQ9NQ84 441 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 MED1Q15648 1581 aaPredicted RBP14.76□□□□□ -0.05
SMC6-201ENST00000351948 GH1P01241 217 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 EMC2Q15006 297 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 PPP6R3Q5H9R7 873 aaPredicted RBP14.76□□□□□ -0.05
SMC6-201ENST00000351948 MOV10L1Q9BXT6 1211 aaKnown RBP14.76□□□□□ -0.05
SMC6-201ENST00000351948 C2orf40Q9H1Z8 148 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 UNC45AQ9H3U1 944 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 HUS1O60921 280 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 IVLP07476 585 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 CCDC170Q8IYT3 715 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 GPD1LQ8N335 351 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 SLITRK6Q9H5Y7 841 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
SMC6-201ENST00000351948 KRT39Q6A163 491 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 CHST13Q8NET6 341 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 TRIM7Q9C029 511 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 SMARCAD1Q9H4L7 1026 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 CEP72Q9P209 647 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 FAM198AQ9UFP1 575 aa14.76□□□□□ -0.05
SMC6-201ENST00000351948 RIC1Q4ADV7 1423 aa14.75□□□□□ -0.05
SMC6-201ENST00000351948 PIK3R2O00459 728 aa14.75□□□□□ -0.05
SMC6-201ENST00000351948 SRGAP2O75044 1071 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms