RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DNERQ8NFT8 737 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 EBAG9O00559 213 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 LMNB2Q03252 620 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 RUFY4Q6ZNE9 571 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 C5P01031 1676 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
SMAD9-201ENST00000350148 GRB10Q13322 594 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 RANBP17Q9H2T7 1088 aaKnown RBP13.14□□□□□ -0.31
SMAD9-201ENST00000350148 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
SMAD9-201ENST00000350148 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 KCNK3O14649 394 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 ECE1P42892 770 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 KRT39Q6A163 491 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 REEP2Q9BRK0 252 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
SMAD9-201ENST00000350148 SLC16A4O15374 487 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 GH1P01241 217 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 ABCB4P21439 1286 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 DSG3P32926 999 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MFSD14CQ5VZR4 134 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 USP49Q70CQ1 688 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MYO1FO00160 1098 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 KIF3CO14782 793 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 VCAM1P19320 739 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
SMAD9-201ENST00000350148 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 APBA1Q02410 837 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 TOPORSQ9NS56 1045 aaPredicted RBP13.13□□□□□ -0.31
SMAD9-201ENST00000350148 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 SLC37A4O43826 429 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
SMAD9-201ENST00000350148 EPHX2P34913 555 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 GYS2P54840 703 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 OTUD6BQ8N6M0 293 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 HOMER3Q9NSC5 361 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
SMAD9-201ENST00000350148 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
SMAD9-201ENST00000350148 PIK3CDO00329 1044 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 HOXC6P09630 235 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 FMR1Q06787 632 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 TAF12Q16514 161 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 GABPAQ06546 454 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 PDZD4Q76G19 769 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 CATSPER3Q86XQ3 398 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 KRIT1O00522 736 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 GRIK5Q16478 980 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 SSU72P8A0A1W2PR75 194 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 RNF8O76064 485 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 TERF2Q15554 542 aa13.12□□□□□ -0.31
SMAD9-201ENST00000350148 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 INTS2Q9H0H0 1204 aaKnown RBP13.12□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 CYP11B2P19099 503 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 KATNAL1Q9BW62 490 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 FAM204AQ9H8W3 233 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 BUB1O43683 1085 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-201ENST00000350148 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 STK4Q13043 487 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
SMAD9-201ENST00000350148 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms