RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 FIZ1Q96SL8 496 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 E7EVH7 732 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 PSMC2P35998 433 aaKnown RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 CCDC174Q6PII3 467 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 VPS36Q86VN1 386 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 THAP2Q9H0W7 228 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 SLC16A3O15427 465 aaKnown RBP19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 TMEM179Q6ZVK1 233 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 NLRP14Q86W24 1093 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 RASGEF1CQ8N431 466 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 ERVK-5Q9HDB9 667 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 FOCADQ5VW36 1801 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 HMGB1P1B2RPK0 211 aaPredicted RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 TRIM37O94972 964 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 FOSP01100 380 aaPredicted RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 CUL1Q13616 776 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 LRCH2Q5VUJ6 765 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 TRMT1LQ7Z2T5 733 aaKnown RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 ACER1Q8TDN7 264 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 ZNF622Q969S3 477 aaKnown RBP eCLIP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 OLFML3Q9NRN5 406 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 TMOD4Q9NZQ9 345 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 AMFRQ9UKV5 643 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 COG5Q9UP83 839 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 BHMG1C9JSJ3 638 aaPredicted RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 FERP16591 822 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 DHX9Q08211 1270 aaKnown RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 ZNF720Q7Z2F6 126 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 HOOK2Q96ED9 719 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 CALR3Q96L12 384 aaKnown RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 SH2D3AQ9BRG2 576 aa19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 NOVA2Q9UNW9 492 aaKnown RBP19.66■□□□□ 0.74
PTP4A3-202ENST00000349124 FOXN3O00409 490 aaPredicted RBP19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 DDX3YO15523 660 aaKnown RBP19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 CPP00450 1065 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 MMP14P50281 582 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 DLG4P78352 724 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 EMC10Q5UCC4 262 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 LMBR1Q8WVP7 490 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 STK33Q9BYT3 514 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 PCIF1Q9H4Z3 704 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 PARVGQ9HBI0 331 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 PKD2L1Q9P0L9 805 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 GOLGA6L10A6NI86 522 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 SLC26A4O43511 780 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 ARP10275 920 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 POU5F1Q01860 360 aaKnown RBP19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 ODF2Q5BJF6 829 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 SLC20A1Q8WUM9 679 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 ALG3Q92685 438 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 GMCL1Q96IK5 515 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 EFCC1Q9HA90 598 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 AGPAT3Q9NRZ7 376 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 CAPN7Q9Y6W3 813 aa19.65■□□□□ 0.74
PTP4A3-202ENST00000349124 LTBP4Q8N2S1 1624 aa19.64■□□□□ 0.74
PTP4A3-202ENST00000349124 PSMD10O75832 226 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 IFT88Q13099 833 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 ODR4Q5SWX8 454 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 ZSWIM2Q8NEG5 633 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 INTS2Q9H0H0 1204 aaKnown RBP19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 ATP8A1Q9Y2Q0 1164 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 DDX39AO00148 427 aaKnown RBP19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 PPATQ06203 517 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 ZYXQ15942 572 aaKnown RBP19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 UBAP2Q5T6F2 1119 aaKnown RBP19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 RNF187Q5TA31 235 aaPredicted RBP19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 TMC3Q7Z5M5 1100 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 FAM178BQ8IXR5 827 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 PLCD3Q8N3E9 789 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 OTUD6BQ8N6M0 293 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 LRRC45Q96CN5 670 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 SYT11Q9BT88 431 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 IDI2Q9BXS1 227 aa19.64■□□□□ 0.73
PTP4A3-202ENST00000349124 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 SF3A3Q12874 501 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 QPCTQ16769 361 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 DACT2Q5SW24 774 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 B4GALNT4Q76KP1 1039 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 ACP6Q9NPH0 428 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 GTPBP10A4D1E9 387 aaKnown RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 MEFVO15553 781 aaPredicted RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 NPR1P16066 1061 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 MDM1Q8TC05 714 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 ATP8B4Q8TF62 1192 aa19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 PRMT6Q96LA8 375 aaPredicted RBP19.63■□□□□ 0.73
PTP4A3-202ENST00000349124 CCDC188H7C350 402 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 CYP3A4P08684 503 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 TNFAIP3P21580 790 aa19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 MAGOHP61326 146 aaKnown RBP19.62■□□□□ 0.73
PTP4A3-202ENST00000349124 RBM26Q5T8P6 1007 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms