RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
PTBP1-201ENST00000349038 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 MTM1Q13496 603 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 LRRC36Q1X8D7 754 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 GRIPAP1Q4V328 841 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 DDX12PQ92771 950 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 CYTH2Q99418 400 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 MAGEF1Q9HAY2 307 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 FLT1P17948 1338 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 IFI16Q16666 785 aaKnown RBP16.36■□□□□ 0.21
PTBP1-201ENST00000349038 TSNAXIP1Q2TAA8 658 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
PTBP1-201ENST00000349038 DNAJC9Q8WXX5 260 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 CUEDC2Q9H467 287 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 AFF2P51816 1311 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 PIAS1O75925 651 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 BRAFP15056 766 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 USP11P51784 963 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 ICA1Q05084 483 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 DEUP1Q05D60 604 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 TBC1D25Q3MII6 688 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 PHC3Q8NDX5 983 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.35■□□□□ 0.211e-8■■■■■ 28.9
PTBP1-201ENST00000349038 DCTN4Q9UJW0 460 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 AMFRQ9UKV5 643 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 BCL9O00512 1426 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
PTBP1-201ENST00000349038 CUL3Q13618 768 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 ZC2HC1CQ53FD0 456 aaPredicted RBP16.35■□□□□ 0.21
PTBP1-201ENST00000349038 GLYCTKQ8IVS8 523 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 P3H4Q92791 437 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 GBP5Q96PP8 586 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 PITPNM3Q9BZ71 974 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 HOMER3Q9NSC5 361 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 LMCD1Q9NZU5 365 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
PTBP1-201ENST00000349038 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 SETDB1Q15047 1291 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PIGWQ7Z7B1 504 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PHLDB2Q86SQ0 1253 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ABTB1Q969K4 478 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ADAM7Q9H2U9 754 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ALG13Q9NP73 1137 aaKnown RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 SLCO1B3Q9NPD5 702 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PRPHP41219 470 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 COBLL1Q53SF7 1204 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ARHGAP22Q7Z5H3 698 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PRUNE1Q86TP1 453 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 KIAA0825Q8IV33 1275 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 C7orf25Q9BPX7 421 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 FAM114A2Q9NRY5 505 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PPP1R9AQ9ULJ8 1098 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 COL4A1P02462 1669 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PJA2O43164 708 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 AHCYL1O43865 530 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 LRRN2O75325 713 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 KCNA3P22001 575 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PPP1R2P41236 205 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ZC3H12AQ5D1E8 599 aaKnown RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 HHATQ5VTY9 493 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 CYP4F22Q6NT55 531 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 DAGLBQ8NCG7 672 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 SCFD2Q8WU76 684 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 SNRNP27Q8WVK2 155 aaKnown RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 PABPC3Q9H361 631 aaKnown RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 ARMCX3Q9UH62 379 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-201ENST00000349038 LNPEPQ9UIQ6 1025 aa16.34■□□□□ 0.21
PTBP1-201ENST00000349038 LAD1O00515 517 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 CLIC2O15247 247 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 ASAP2O43150 1006 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 NOL4O94818 638 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.21
PTBP1-201ENST00000349038 ITIH4Q14624 930 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 CNGA2Q16280 664 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 MYOCDQ8IZQ8 938 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 RDH13Q8NBN7 331 aa16.33■□□□□ 0.21
PTBP1-201ENST00000349038 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.21
PTBP1-201ENST00000349038 RNF8O76064 485 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms