RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 BLMHQ13867 455 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 TXLNGYQ9BZA5 131 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 SLITRK6Q9H5Y7 841 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 ARHGEF10LQ9HCE6 1279 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 NR2E1Q9Y466 385 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 COL4A3BPQ9Y5P4 624 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 ESYT2A0FGR8 921 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 TRAF5O00463 557 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCARF1-202ENST00000348987 ASIC2Q16515 512 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 ATP8B4Q8TF62 1192 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 KLHL29Q96CT2 875 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 EVI5O60447 810 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 PEX26Q7Z412 305 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 TBC1D16Q8TBP0 767 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 RAD54LQ92698 747 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 TBC1D7Q9P0N9 293 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 NBPF20Q3BBV1 942 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 DAAM2Q86T65 1068 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 HAS1Q92839 578 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 TSG101Q99816 390 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 AIPL1Q9NZN9 384 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 GAKO14976 1311 aa20.2■□□□□ 0.82
SCARF1-202ENST00000348987 RGS16O15492 202 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 SNX3O60493 162 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 SNUPNO95149 360 aaKnown RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 SNX1Q13596 522 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 CRY2Q49AN0 593 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 ADGRF4Q8IZF3 695 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 TPCN2Q8NHX9 752 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 UHMK1Q8TAS1 419 aaKnown RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 KCNV2Q8TDN2 545 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 RNF25Q96BH1 459 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 PGM2Q96G03 612 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 FAM163AQ96GL9 167 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 STK17AQ9UEE5 414 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 LY75O60449 1722 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 ATP2A2P16615 1042 aaKnown RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 PLCG2P16885 1265 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 COPB2P35606 906 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 GABPAQ06546 454 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 ZNF571Q7Z3V5 609 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-202ENST00000348987 TRIM33Q9UPN9 1127 aa20.19■□□□□ 0.82
SCARF1-202ENST00000348987 PVALEFA0A1B0GWK0 134 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 SPDYE3A6NKU9 549 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 BTNL10A8MVZ5 291 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 PECAM1P16284 738 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 ATP2B4P23634 1241 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 PMS2P54278 862 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 RWDD2BP57060 319 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 CACNB1Q02641 598 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 SLC29A2Q14542 456 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 RBBP5Q15291 538 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 UBAP2Q5T6F2 1119 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 ADAT2Q7Z6V5 191 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 RASGEF1CQ8N431 466 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 A6NHS1 94 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 IRF6O14896 467 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 NUDT17P0C025 328 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 MSH2P43246 934 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 SLCO1A2P46721 670 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 IFI16Q16666 785 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 TMEM266Q2M3C6 531 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 KRT79Q5XKE5 535 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 DENND2CQ68D51 928 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 KCTD1Q719H9 257 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 PABPC3Q9H361 631 aaKnown RBP20.18■□□□□ 0.82
SCARF1-202ENST00000348987 ADAM22Q9P0K1 906 aa20.18■□□□□ 0.82
SCARF1-202ENST00000348987 CCDC169A6NNP5 214 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 FGGP02679 453 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 SNHG28P0DPA3 235 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 COPS2P61201 443 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 FKBP3Q00688 224 aaKnown RBP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 GALNTL6Q49A17 601 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 PROM2Q8N271 834 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 DNAJC19Q96DA6 116 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 NSRP1Q9H0G5 558 aaKnown RBP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 QTRT2Q9H974 415 aaKnown RBP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 LIN7AO14910 233 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 PLTPP55058 493 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 TAF11Q15544 211 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 SHROOM1Q2M3G4 852 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 OSBPL1AQ9BXW6 950 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 NAGPAQ9UK23 515 aa20.17■□□□□ 0.82
SCARF1-202ENST00000348987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCARF1-202ENST00000348987 NPHP3-ACAD11A0A0J9YXS1 232 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L10C9JJH3 530 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 HGSO14964 777 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ACTN1P12814 892 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 LRRC14Q15048 493 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 DOK7Q18PE1 504 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms