RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PDLIM1O00151 329 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 RNF8O76064 485 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 PDE6BP35913 854 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 DRG2P55039 364 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SIK1P57059 783 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 POLR2FP61218 127 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 IFI35P80217 286 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 GRB10Q13322 594 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 ADAM9Q13443 819 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 ASIC2Q16515 512 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SLC35G1Q2M3R5 365 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 DZIP1Q86YF9 867 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 CFAP61Q8NHU2 1237 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 RAD54LQ92698 747 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 TMEM47Q9BQJ4 181 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 GORASP1Q9BQQ3 440 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SEC63Q9UGP8 760 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 ADAMTS1Q9UHI8 967 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 A0A0A6YYK5 440 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 MYMKA6NI61 221 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TTC36A6NLP5 189 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 LDHCP07864 332 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PTENP60484 403 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 KLRC3Q07444 240 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TMEM119Q4V9L6 283 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 NUGGCQ68CJ6 796 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 RNF43Q68DV7 783 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ARHGAP22Q7Z5H3 698 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SDCCAG8Q86SQ7 713 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 REXO1Q8N1G1 1221 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ENDOVQ8N8Q3 282 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 NAP1L4Q99733 375 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 CYP39A1Q9NYL5 469 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 DIS3Q9Y2L1 958 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 C2CD2Q9Y426 696 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 CD2APQ9Y5K6 639 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 UNC5CO95185 931 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TECP42680 631 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 NOVP48745 357 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 NPEPPSP55786 919 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 KLC1Q07866 573 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 CALCRLQ16602 461 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ZCWPW2Q504Y3 356 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 KRT79Q5XKE5 535 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TRIM68Q6AZZ1 485 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PEX26Q7Z412 305 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SPATA21Q7Z572 469 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SYCE1Q8N0S2 351 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 B4GALNT2Q8NHY0 566 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TBCKQ8TEA7 893 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 DTNBP1Q96EV8 351 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 IFT43Q96FT9 208 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TRAPPC9Q96Q05 1148 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 EPAS1Q99814 870 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 ERP44Q9BS26 406 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TRIM51Q9BSJ1 452 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 BZW2Q9Y6E2 419 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-202ENST00000348749 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 TLDC2A0PJX2 215 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PEX11AO75192 247 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 ATP5HO75947 161 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 TPBGLP0DKB5 382 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PRDX5P30044 214 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PCK1P35558 622 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 IFNAR2P48551 515 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 PEX5P50542 639 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 TUBP50607 506 aa11.15□□□□□ -0.62
CHRNA1-202ENST00000348749 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms