RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 HIC1Q14526 733 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 MTHFD1LQ6UB35 978 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 MYCT1Q8N699 235 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 TMEM143Q96AN5 459 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 POLR3FQ9H1D9 316 aaPredicted RBP29.95■■■□□ 2.38
SSBP4-202ENST00000348495 TSPY26PQ9H489 355 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 C17orf75Q9HAS0 396 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 MBLAC1A4D2B0 266 aaPredicted RBP29.94■■■□□ 2.38
SSBP4-202ENST00000348495 CHMP4BP1P59074 171 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 DRP2Q13474 957 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 ANO6Q4KMQ2 910 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 C11orf57Q6ZUT1 292 aaPredicted RBP29.94■■■□□ 2.38
SSBP4-202ENST00000348495 PPP1R13LQ8WUF5 828 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 ZBTB10Q96DT7 871 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 FGFBP2Q9BYJ0 223 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 SLC39A2Q9NP94 309 aa29.94■■■□□ 2.38
SSBP4-202ENST00000348495 LARSQ9P2J5 1176 aaKnown RBP29.94■■■□□ 2.38
SSBP4-202ENST00000348495 NBPF20Q3BBV1 942 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 COBLL1Q53SF7 1204 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 ODR4Q5SWX8 454 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 DNAJC25Q9H1X3 360 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 TBC1D7Q9P0N9 293 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 HDAC6Q9UBN7 1215 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 KAT6AQ92794 2004 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 GRIN2DO15399 1336 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 PPP1R3GB7ZBB8 358 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 CD44P16070 742 aaKnown RBP29.93■■■□□ 2.38
SSBP4-202ENST00000348495 IER5Q5VY09 327 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 GAS2L3Q86XJ1 694 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 C7orf31Q8N865 590 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 GLIS3Q8NEA6 775 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 BSNDQ8WZ55 320 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 CRISPLD2Q9H0B8 497 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 SUGCTQ9HAC7 445 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 PHF24Q9UPV7 400 aa29.93■■■□□ 2.38
SSBP4-202ENST00000348495 EFCAB12Q6NXP0 572 aa29.92■■■□□ 2.38
SSBP4-202ENST00000348495 SESTD1Q86VW0 696 aa29.92■■■□□ 2.38
SSBP4-202ENST00000348495 LRRC71Q8N4P6 559 aa29.92■■■□□ 2.38
SSBP4-202ENST00000348495 RETREG2Q8NC44 543 aa29.92■■■□□ 2.38
SSBP4-202ENST00000348495 TCP11Q8WWU5 503 aa29.92■■■□□ 2.38
SSBP4-202ENST00000348495 DNM1LO00429 736 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 MAPTP10636 758 aaKnown RBP29.91■■■□□ 2.38
SSBP4-202ENST00000348495 FAM178BQ8IXR5 827 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 ASAP3Q8TDY4 903 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 NTPCRQ9BSD7 190 aaKnown RBP29.91■■■□□ 2.38
SSBP4-202ENST00000348495 GLRA2P23416 452 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 PRCPP42785 496 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 CASP5P51878 434 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 NFRKBQ6P4R8 1299 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 EPM2AIP1Q7L775 607 aaPredicted RBP29.91■■■□□ 2.38
SSBP4-202ENST00000348495 ADSSL1Q8N142 457 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 SPIRE2Q8WWL2 714 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 MRPL44Q9H9J2 332 aaKnown RBP29.91■■■□□ 2.38
SSBP4-202ENST00000348495 GTF2IRD1Q9UHL9 959 aa29.91■■■□□ 2.38
SSBP4-202ENST00000348495 C17orf102A2RUQ5 167 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 GJB1P08034 283 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 NPTX2P47972 431 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 PEX3P56589 373 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 DMP1Q13316 513 aaPredicted RBP29.9■■■□□ 2.38
SSBP4-202ENST00000348495 ZNF720Q7Z2F6 126 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 METTL13Q8N6R0 699 aa29.9■■■□□ 2.38
SSBP4-202ENST00000348495 PRPF31Q8WWY3 499 aaKnown RBP29.9■■■□□ 2.38
SSBP4-202ENST00000348495 A0A1W2PQ45 241 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-202ENST00000348495 A0A1W2PQY0 241 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 CAVIN2O95810 425 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 CLCN3P51790 818 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 CT47A1Q5JQC4 288 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-202ENST00000348495 PSPC1Q8WXF1 523 aaKnown RBP29.89■■■□□ 2.38
SSBP4-202ENST00000348495 GLT1D1Q96MS3 346 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 STRA6Q9BX79 667 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 ST6GALNAC4Q9H4F1 302 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 DACH1Q9UI36 760 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 MAPK8IP1Q9UQF2 711 aa29.89■■■□□ 2.38
SSBP4-202ENST00000348495 KBTBD13C9JR72 458 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 SGPL1O95470 568 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 GNAT1P11488 350 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 NMT1P30419 496 aaKnown RBP29.88■■■□□ 2.37
SSBP4-202ENST00000348495 NCKAP1LP55160 1127 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 GUF1Q8N442 669 aaKnown RBP29.88■■■□□ 2.37
SSBP4-202ENST00000348495 U2AF1L4Q8WU68 220 aaKnown RBP29.88■■■□□ 2.37
SSBP4-202ENST00000348495 SCFD1Q8WVM8 642 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 SUCLA2Q9P2R7 463 aaPredicted RBP29.88■■■□□ 2.37
SSBP4-202ENST00000348495 EVPLQ92817 2033 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 PPP1R37O75864 691 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 DNM2P50570 870 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 ZNF200P98182 395 aaPredicted RBP29.88■■■□□ 2.37
SSBP4-202ENST00000348495 ITGA7Q13683 1181 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 IFT74Q96LB3 600 aa29.88■■■□□ 2.37
SSBP4-202ENST00000348495 BRCA2P51587 3418 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 TREHO43280 583 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 MYBP10242 640 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 NAMPTP43490 491 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 MXD4Q14582 209 aaPredicted RBP29.87■■■□□ 2.37
SSBP4-202ENST00000348495 PPP2R5AQ15172 486 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 BMT2Q1RMZ1 405 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 KIAA0319LQ8IZA0 1049 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 SLC17A8Q8NDX2 589 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 KCNN1Q92952 543 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 KCNG1Q9UIX4 513 aa29.87■■■□□ 2.37
SSBP4-202ENST00000348495 SMIM35A0A1B0GVV1 85 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms