RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 HOXC6P09630 235 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ABCD1P33897 745 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 GRM1Q13255 1194 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ARID5BQ14865 1188 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 VWA3BQ502W6 1294 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ARMCX5Q6P1M9 558 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 SPIRE2Q8WWL2 714 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 BBXQ8WY36 941 aaPredicted RBP20.53■□□□□ 0.88
PTN-201ENST00000348225 HVCN1Q96D96 273 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 IFT74Q96LB3 600 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ACCSQ96QU6 501 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 SMARCAD1Q9H4L7 1026 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 SLC16A3O15427 465 aaKnown RBP20.53■□□□□ 0.88
PTN-201ENST00000348225 TGFB1I1O43294 461 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 KCNA1Q09470 495 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 NOGQ13253 232 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 ACVR2BQ13705 512 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 MIIPQ5JXC2 388 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 HAUS6Q7Z4H7 955 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 CCDC112Q8NEF3 446 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 DHX33Q9H6R0 707 aaKnown RBP20.53■□□□□ 0.88
PTN-201ENST00000348225 KMT5AQ9NQR1 393 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 XPNPEP1Q9NQW7 623 aa20.53■□□□□ 0.88
PTN-201ENST00000348225 CGNQ9P2M7 1197 aaKnown RBP20.53■□□□□ 0.88
PTN-201ENST00000348225 ZHX1Q9UKY1 873 aaPredicted RBP20.53■□□□□ 0.88
PTN-201ENST00000348225 CCDC169A6NNP5 214 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 H0YCG3 227 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTN-201ENST00000348225 RGS2P41220 211 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 ADCYAP1R1P41586 468 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 GTF2BQ00403 316 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 TBC1D8BQ0IIM8 1120 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 TARBP2Q15633 366 aaKnown RBP20.52■□□□□ 0.88
PTN-201ENST00000348225 IQSEC1Q6DN90 963 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 EXOC8Q8IYI6 725 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 PPTC7Q8NI37 304 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 ATP8B4Q8TF62 1192 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 POLR3FQ9H1D9 316 aaPredicted RBP20.52■□□□□ 0.88
PTN-201ENST00000348225 NDST4Q9H3R1 872 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 EXOC7Q9UPT5 735 aa20.52■□□□□ 0.88
PTN-201ENST00000348225 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
PTN-201ENST00000348225 SLC16A4O15374 487 aa20.51■□□□□ 0.87
PTN-201ENST00000348225 NPTX2P47972 431 aa20.51■□□□□ 0.87
PTN-201ENST00000348225 SNRPFP62306 86 aaKnown RBP20.51■□□□□ 0.87
PTN-201ENST00000348225 FRMD5Q7Z6J6 570 aa20.51■□□□□ 0.87
PTN-201ENST00000348225 REM2Q8IYK8 340 aaPredicted RBP20.51■□□□□ 0.87
PTN-201ENST00000348225 NTPCRQ9BSD7 190 aaKnown RBP20.51■□□□□ 0.87
PTN-201ENST00000348225 METTL14Q9HCE5 456 aaKnown RBP20.51■□□□□ 0.87
PTN-201ENST00000348225 AGPAT3Q9NRZ7 376 aa20.51■□□□□ 0.87
PTN-201ENST00000348225 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
PTN-201ENST00000348225 AKR1B15C9JRZ8 316 aaPredicted RBP20.5■□□□□ 0.87
PTN-201ENST00000348225 EPB41P11171 864 aaKnown RBP20.5■□□□□ 0.87
PTN-201ENST00000348225 SKILP12757 684 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 SCP2P22307 547 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 CCZ1BP86790 482 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 CCZ1P86791 482 aaPredicted RBP20.5■□□□□ 0.87
PTN-201ENST00000348225 PPP2R3AQ06190 1150 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 MYBPC2Q14324 1141 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 DUSP28Q4G0W2 176 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 TMEM63BQ5T3F8 832 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 KSR1Q8IVT5 923 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 USP6NLQ92738 828 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 APBA2Q99767 749 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 PYCARDQ9ULZ3 195 aa20.5■□□□□ 0.87
PTN-201ENST00000348225 CLIC2O15247 247 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 GAS2O43903 313 aaKnown RBP20.49■□□□□ 0.87
PTN-201ENST00000348225 ZNF500O60304 480 aaPredicted RBP20.49■□□□□ 0.87
PTN-201ENST00000348225 ECM2O94769 699 aaPredicted RBP20.49■□□□□ 0.87
PTN-201ENST00000348225 MARK3P27448 753 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 PPP2R5AQ15172 486 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 OLFML2BQ68BL8 750 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 TRIM50Q86XT4 487 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 CNGA4Q8IV77 575 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 TMEM161BQ8NDZ6 487 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 ERGIC2Q96RQ1 377 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 ZIC5Q96T25 663 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 JPH2Q9BR39 696 aaPredicted RBP20.49■□□□□ 0.87
PTN-201ENST00000348225 MKNK1Q9BUB5 465 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 ERAP1Q9NZ08 941 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 ARMCX3Q9UH62 379 aaPredicted RBP20.49■□□□□ 0.87
PTN-201ENST00000348225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.49■□□□□ 0.87
PTN-201ENST00000348225 YY1P25490 414 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 SOX10P56693 466 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 RBL2Q08999 1139 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 PLCB4Q15147 1175 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 CEP135Q66GS9 1140 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 SLC9A9Q8IVB4 645 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 KIAA1524Q8TCG1 905 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 BSNDQ8WZ55 320 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 IQCDQ96DY2 449 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 NUP58Q9BVL2 599 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 TRPC6Q9Y210 931 aa20.49■□□□□ 0.87
PTN-201ENST00000348225 MGAMO43451 1857 aa20.48■□□□□ 0.87
PTN-201ENST00000348225 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms