RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RAD54LQ92698 747 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 DNAJC17Q9NVM6 304 aaKnown RBP16.57■□□□□ 0.24
LMNA-201ENST00000347559 HAO1Q9UJM8 370 aa16.57■□□□□ 0.24
LMNA-201ENST00000347559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
LMNA-201ENST00000347559 RIPK2O43353 540 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GNAZP19086 355 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 CCNG1P51959 295 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 MGAT5Q09328 741 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TNIP1Q15025 636 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 DIXDC1Q155Q3 683 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 MOV10L1Q9BXT6 1211 aaKnown RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 STK17AQ9UEE5 414 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 LRRC42Q9Y546 428 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 DUOX1Q9NRD9 1551 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GFPT2O94808 682 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 UNC5CO95185 931 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ATP6V1C1P21283 382 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 MAPK7Q13164 816 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ZCWPW2Q504Y3 356 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 KRT79Q5XKE5 535 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 EZH1Q92800 747 aaPredicted RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 ITFG2Q969R8 447 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 EPAS1Q99814 870 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TBK1Q9UHD2 729 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ASAP1Q9ULH1 1129 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GLI3P10071 1580 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TMEM110-MUSTN1A8MSY1 372 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 PEX11AO75192 247 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GJB6O95452 261 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 GM2AP17900 193 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 PEX5P50542 639 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TSNAXIP1Q2TAA8 658 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 HERC4Q5GLZ8 1057 aaPredicted RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 SPDYCQ5MJ68 293 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ECHDC2Q86YB7 292 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 TTC8Q8TAM2 541 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
LMNA-201ENST00000347559 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
LMNA-201ENST00000347559 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.249e-21■■■□□ 16.5
LMNA-201ENST00000347559 MARCH6O60337 910 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 TPBGLP0DKB5 382 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 ALDH3A1P30838 453 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
LMNA-201ENST00000347559 EXOC3L4Q17RC7 722 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 SLFN11Q7Z7L1 901 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 GLYCTKQ8IVS8 523 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 UCMAQ8WVF2 138 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 DNAJC9Q8WXX5 260 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 ERP27Q96DN0 273 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 GRHL1Q9NZI5 618 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 MAD2L2Q9UI95 211 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 ENTPD5O75356 428 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 PTDSS1P48651 473 aaKnown RBP16.55■□□□□ 0.24
LMNA-201ENST00000347559 TBC1D25Q3MII6 688 aa16.55■□□□□ 0.24
LMNA-201ENST00000347559 O00370 1275 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 TDP2O95551 362 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 STARD3NLO95772 234 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 SP100P23497 879 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 NR2F2P24468 414 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 MCM9Q9NXL9 1143 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 RGL1Q9NZL6 768 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 AJAP1Q9UKB5 411 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 BZW2Q9Y6E2 419 aaKnown RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 FAM187AA6NFU0 413 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 CETN3O15182 167 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 BRAFP15056 766 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 DRAXINQ8NBI3 349 aaPredicted RBP16.54■□□□□ 0.24
LMNA-201ENST00000347559 FAM13CQ8NE31 585 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 C6orf50Q9HD87 102 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 TXLNGQ9NUQ3 528 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 SLC37A4O43826 429 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 RNF8O76064 485 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 FGRP09769 529 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 CNGA1P29973 690 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 CHRNDQ07001 517 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 MPP2Q14168 576 aa16.54■□□□□ 0.24
LMNA-201ENST00000347559 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms