RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TYW1Q9NV66 732 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 DMAC2Q9NW81 257 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
ECM1-201ENST00000346569 UBE4BO95155 1302 aa12.11□□□□□ -0.47
ECM1-201ENST00000346569 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 ADCY6O43306 1168 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 TPM3P06753 285 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 ARL2P36404 184 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 MAP2K2P36507 400 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 PSMC4P43686 418 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 NPTX2P47972 431 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 PEX3P56589 373 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 SOX10P56693 466 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 LACTBP83111 547 aaPredicted RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 STXBP4Q6ZWJ1 553 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 ANKRD20A12PQ8NF67 263 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 GLG1Q92896 1179 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 APBA2Q99767 749 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 TUBGCP2Q9BSJ2 902 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 ATP6V0A4Q9HBG4 840 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
ECM1-201ENST00000346569 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
ECM1-201ENST00000346569 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 N4BP3O15049 544 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 CETN3O15182 167 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 CALUO43852 315 aaPredicted RBP12.09□□□□□ -0.47
ECM1-201ENST00000346569 HBP1O60381 514 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 CYP2C19P33261 490 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 RFC5P40937 340 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
ECM1-201ENST00000346569 CAP1Q01518 475 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 TMC6Q7Z403 805 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 ARHGAP39Q9C0H5 1083 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 RNPEPQ9H4A4 650 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
ECM1-201ENST00000346569 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
ECM1-201ENST00000346569 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
ECM1-201ENST00000346569 A6NJR5 290 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 LGALS16A8MUM7 142 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 SLC16A4O15374 487 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 GNA14O95837 355 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 LGALS2P05162 132 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 SMTNP53814 917 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
ECM1-201ENST00000346569 FCGRTP55899 365 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 SP3Q02447 781 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 MYBPC2Q14324 1141 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 EMC2Q15006 297 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 SLC9A9Q8IVB4 645 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
ECM1-201ENST00000346569 BORCS6Q96GS4 357 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 ZNF830Q96NB3 372 aaPredicted RBP12.08□□□□□ -0.48
ECM1-201ENST00000346569 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 GBP3Q9H0R5 595 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 KCNF1Q9H3M0 494 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 TMEM206Q9H813 350 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 ERAP1Q9NZ08 941 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 CGNQ9P2M7 1197 aaKnown RBP12.08□□□□□ -0.48
ECM1-201ENST00000346569 GABRQQ9UN88 632 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 Q9Y3F1 56 aa12.08□□□□□ -0.48
ECM1-201ENST00000346569 A0A1W2PQC6 194 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 K7ENM7 598 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 CLIC2O15247 247 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 HSPA8P11142 646 aaKnown RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 NR2F2P24468 414 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 RPL13P26373 211 aaKnown RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 MARK3P27448 753 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 MTIF2P46199 727 aaKnown RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 DNM2P50570 870 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 GSDMDP57764 484 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 MCCD1P59942 119 aaPredicted RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 ARID5BQ14865 1188 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 IER5Q5VY09 327 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 CREBRFQ8IUR6 639 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms