RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 MORN1Q5T089 497 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 HAUS6Q7Z4H7 955 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 FRMD5Q7Z6J6 570 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 SYCP3Q8IZU3 236 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 TC2NQ8N9U0 490 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 SPIRE2Q8WWL2 714 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 HVCN1Q96D96 273 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 TINF2Q9BSI4 451 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 XPNPEP1Q9NQW7 623 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 KCNG1Q9UIX4 513 aa23.6■■□□□ 1.37
TSPAN3-202ENST00000346495 GH1P01241 217 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 CLCN1P35523 988 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 RFC5P40937 340 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 TM4SF4P48230 202 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 MAP2K5Q13163 448 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 EMC2Q15006 297 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 KSR1Q8IVT5 923 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 TRIM59Q8IWR1 403 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 NPLOC4Q8TAT6 608 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 GLG1Q92896 1179 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 ERGIC2Q96RQ1 377 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 CGNQ9P2M7 1197 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 GYPCP04921 128 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 SLC26A2P50443 739 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 ADKP55263 362 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 ARHGAP1Q07960 439 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 TARBP2Q15633 366 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 CEP135Q66GS9 1140 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 CNGA4Q8IV77 575 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 BBXQ8WY36 941 aaPredicted RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 IFT74Q96LB3 600 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 PANX2Q96RD6 677 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 NTPCRQ9BSD7 190 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 NUP58Q9BVL2 599 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 TMX1Q9H3N1 280 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 ABHD16BQ9H3Z7 469 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 DHX33Q9H6R0 707 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 METTL14Q9HCE5 456 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 FAM184BQ9ULE4 1060 aa23.59■■□□□ 1.37
TSPAN3-202ENST00000346495 CCDC169A6NNP5 214 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 NKRFO15226 690 aaKnown RBP eCLIP23.58■■□□□ 1.362e-6■□□□□ 8.4
TSPAN3-202ENST00000346495 CLIC2O15247 247 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 SLC16A4O15374 487 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 EPB41P11171 864 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 NPTX2P47972 431 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 GOLGA8FQ08AF8 430 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 GOLGA8DPQ0D2H9 430 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 MYBPC2Q14324 1141 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 SLC7A3Q8WY07 619 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 EMID1Q96A84 441 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 CCDC51Q96ER9 411 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 CEP89Q96ST8 783 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 POLR3FQ9H1D9 316 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 SMARCAD1Q9H4L7 1026 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 KMT5AQ9NQR1 393 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 AGPAT3Q9NRZ7 376 aa23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.58■■□□□ 1.36
TSPAN3-202ENST00000346495 MFAP3LO75121 409 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 ABCD1P33897 745 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 SNRPFP62306 86 aaKnown RBP23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 PPP2R3AQ06190 1150 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 SYCP1Q15431 976 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 TMEM63BQ5T3F8 832 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 RETREG2Q8NC44 543 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 CPLX3Q8WVH0 158 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 ARMCX3Q9UH62 379 aaPredicted RBP23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 EXOC7Q9UPT5 735 aa23.57■■□□□ 1.36
TSPAN3-202ENST00000346495 H0YCG3 227 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 TOMM70O94826 608 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 CASP14P31944 242 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 ADCYAP1R1P41586 468 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 KCNJ6P48051 423 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 ACVR2BQ13705 512 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 NOLC1Q14978 699 aaKnown RBP eCLIP23.56■■□□□ 1.364e-6■□□□□ 8.2
TSPAN3-202ENST00000346495 SLC9A9Q8IVB4 645 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 TMEM161BQ8NDZ6 487 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 ATP8B4Q8TF62 1192 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 BSNDQ8WZ55 320 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 IQCDQ96DY2 449 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 MKNK1Q9BUB5 465 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 DMAC2Q9NW81 257 aa23.56■■□□□ 1.36
TSPAN3-202ENST00000346495 AKAP3O75969 853 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 HOXC6P09630 235 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 PSMC2P35998 433 aaKnown RBP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 SOX10P56693 466 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 CRHR2Q13324 411 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 IRF5Q13568 498 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 IQSEC1Q6DN90 963 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 EXOC8Q8IYI6 725 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 PCMTD1Q96MG8 357 aaPredicted RBP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 BAG1Q99933 345 aaPredicted RBP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 IKZF4Q9H2S9 585 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 SPTLC3Q9NUV7 552 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 FXR1P51114 621 aaKnown RBP eCLIP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 PAXIP1Q6ZW49 1069 aaPredicted RBP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 C12orf56Q8IXR9 622 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 PPTC7Q8NI37 304 aa23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 ZHX1Q9UKY1 873 aaPredicted RBP23.55■■□□□ 1.36
TSPAN3-202ENST00000346495 TBX20Q9UMR3 447 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms