RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CCDC63Q8NA47 563 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 LNX1Q8TBB1 728 aaPredicted RBP19.29■□□□□ 0.68
VHL-202ENST00000345392 FBXO25Q8TCJ0 367 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 ZDHHC18Q9NUE0 388 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 L3MBTL1Q9Y468 752 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 DAAM1Q9Y4D1 1078 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 IGSF9BQ9UPX0 1349 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 VIMP08670 466 aaKnown RBP19.29■□□□□ 0.68
VHL-202ENST00000345392 DUPD1Q68J44 220 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 CUL5Q93034 780 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 CENPTQ96BT3 561 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 STAMBPL1Q96FJ0 436 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 ERP44Q9BS26 406 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 RAB17Q9H0T7 212 aa19.29■□□□□ 0.68
VHL-202ENST00000345392 LDHCP07864 332 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 AKR1B1P15121 316 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 MMP13P45452 471 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 DENND2CQ68D51 928 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 PABPC3Q9H361 631 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 ATP6V0A4Q9HBG4 840 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 KDM3AQ9Y4C1 1321 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 DDX3YO15523 660 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 PTENP60484 403 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 KCNA1Q09470 495 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.68
VHL-202ENST00000345392 NAA25Q14CX7 972 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 KNOP1Q1ED39 458 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 HYIQ5T013 277 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 DPP8Q6V1X1 898 aaPredicted RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 CCDC113Q9H0I3 377 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 IKZF4Q9H2S9 585 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 JMJD4Q9H9V9 463 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 INTS9Q9NV88 658 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 TMOD4Q9NZQ9 345 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 PCDHB13Q9Y5F0 798 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 A0A0A6YYK5 440 aaPredicted RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 RGS16O15492 202 aaPredicted RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 EVI5O60447 810 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 SLC12A3P55017 1021 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 JAM2P57087 298 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 KLRC3Q07444 240 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 NBPF9Q3BBW0 867 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 PIGWQ7Z7B1 504 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 ADGRF4Q8IZF3 695 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 THOC1Q96FV9 657 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 DHX36Q9H2U1 1008 aaKnown RBP19.28■□□□□ 0.68
VHL-202ENST00000345392 SEMA4AQ9H3S1 761 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 ABCF3Q9NUQ8 709 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 SLC12A4Q9UP95 1085 aa19.28■□□□□ 0.68
VHL-202ENST00000345392 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 KRT13P13646 458 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 MYO1EQ12965 1108 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 CCDC38Q502W7 563 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 SAMD15Q9P1V8 674 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 AGAP1Q9UPQ3 857 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 CD2APQ9Y5K6 639 aa19.27■□□□□ 0.68
VHL-202ENST00000345392 GPR75-ASB3A0A0A6YYF3 556 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 hCG_1984214I3L0E3 225 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 ZNF713Q8N859 430 aaPredicted RBP19.27■□□□□ 0.67
VHL-202ENST00000345392 EPS8L3Q8TE67 593 aaKnown RBP19.27■□□□□ 0.67
VHL-202ENST00000345392 SLC35C1Q96A29 364 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 C18orf8Q96DM3 657 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 TRAF3IP3Q9Y228 551 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.67
VHL-202ENST00000345392 RSPH10B2B2RC85 870 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 ASAP2O43150 1006 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 NUDT17P0C025 328 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 RSPH10BP0C881 870 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 CLK2P49760 499 aaKnown RBP19.26■□□□□ 0.67
VHL-202ENST00000345392 GIT2Q14161 759 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 ZDHHC24Q6UX98 284 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 TRPM8Q7Z2W7 1104 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 TAX1BP1Q86VP1 789 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 JAMLQ86YT9 394 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
VHL-202ENST00000345392 ARHGEF26Q96DR7 871 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 PLS1Q14651 629 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 FAM196AQ6ZSG2 479 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 KCTD1Q719H9 257 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 ALG3Q92685 438 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 REEP2Q9BRK0 252 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 PSTPIP2Q9H939 334 aa19.26■□□□□ 0.67
VHL-202ENST00000345392 SEPT11Q9NVA2 429 aaKnown RBP19.26■□□□□ 0.67
VHL-202ENST00000345392 MTMR4Q9NYA4 1195 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms