RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
RUNX1-202ENST00000344691 COPEO14579 308 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 RMDN3Q96TC7 470 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 WDR11Q9BZH6 1224 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 RRP15Q9Y3B9 282 aaKnown RBP16.3■□□□□ 0.2
RUNX1-202ENST00000344691 LUC7L3O95232 432 aaKnown RBP16.3■□□□□ 0.2
RUNX1-202ENST00000344691 SLFN14P0C7P3 912 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 PPP3CCP48454 512 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 KRT31Q15323 416 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 STXBP2Q15833 593 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 NDUFAF2Q8N183 169 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 RUNDC3BQ96NL0 473 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 SENP1Q9P0U3 644 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 GRIK1P39086 918 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
RUNX1-202ENST00000344691 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 YAF2Q8IY57 180 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
RUNX1-202ENST00000344691 CDC23Q9UJX2 597 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 MTM1Q13496 603 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 ARID5BQ14865 1188 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 CIAPIN1Q6FI81 312 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 SCOCQ9UIL1 159 aa16.3■□□□□ 0.2
RUNX1-202ENST00000344691 IQANK1A0A1B0GTG1 560 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PPM1NQ8N819 430 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 SRPK1Q96SB4 655 aaKnown RBP16.29■□□□□ 0.2
RUNX1-202ENST00000344691 NFKBIL1Q9UBC1 381 aaPredicted RBP16.29■□□□□ 0.2
RUNX1-202ENST00000344691 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 SCINQ9Y6U3 715 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
RUNX1-202ENST00000344691 SUPT3HO75486 399 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 ARIH2O95376 493 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
RUNX1-202ENST00000344691 GPC3P51654 580 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 CSE1LP55060 971 aaKnown RBP16.29■□□□□ 0.2
RUNX1-202ENST00000344691 AP1ARQ63HQ0 302 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PAGE5Q96GU1 130 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 KLC2Q9H0B6 622 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 NCK2O43639 380 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 ADD2P35612 726 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PWP1Q13610 501 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 SEMA3EO15041 775 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 GYG2O15488 501 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 CYP21A2P08686 494 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 TSPY1Q01534 308 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 USP33Q8TEY7 942 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 UBE4BO95155 1302 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 NNMTP40261 264 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 TRIM42Q8IWZ5 723 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 DYRK4Q9NR20 520 aa16.29■□□□□ 0.2
RUNX1-202ENST00000344691 HUS1O60921 280 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 COPS2P61201 443 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 TJP3O95049 919 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 MMP1P03956 469 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 CTSHP09668 335 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 KPNA2P52292 529 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 ANKMY2Q8IV38 441 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 SRRM1Q8IYB3 904 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 NUP93Q8N1F7 819 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 RASA4BC9J798 803 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 RASA4O43374 803 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 EPHB4P54760 987 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 AARS2Q5JTZ9 985 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 LRRC8EQ6NSJ5 796 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 PITPNM3Q9BZ71 974 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 MED4Q9NPJ6 270 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 TRIM55Q9BYV6 548 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 FOXP1Q9H334 677 aaPredicted RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 PPARGP37231 505 aaPredicted RBP16.28■□□□□ 0.2
RUNX1-202ENST00000344691 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
RUNX1-202ENST00000344691 FAM167BQ9BTA0 163 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms