RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TEX2Q8IWB9 1127 aa23.33■■□□□ 1.33
CCDC38-201ENST00000344280 KLHL7Q8IXQ5 586 aa23.33■■□□□ 1.33
CCDC38-201ENST00000344280 MKNK1Q9BUB5 465 aa23.33■■□□□ 1.33
CCDC38-201ENST00000344280 ZNF341Q9BYN7 854 aa23.33■■□□□ 1.33
CCDC38-201ENST00000344280 TMEM59LQ9UK28 342 aa23.33■■□□□ 1.33
CCDC38-201ENST00000344280 TNS1Q9HBL0 1735 aaKnown RBP23.33■■□□□ 1.32
CCDC38-201ENST00000344280 RAD51CO43502 376 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 PPP1R12BO60237 982 aaPredicted RBP23.33■■□□□ 1.32
CCDC38-201ENST00000344280 PPP1R37O75864 691 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 SOX5P35711 763 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 STAT1P42224 750 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 CAVIN3Q969G5 261 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 TRERF1Q96PN7 1200 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 STRA6Q9BX79 667 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 FRMD4BQ9Y2L6 1034 aa23.33■■□□□ 1.32
CCDC38-201ENST00000344280 TMCO5BA8MYB1 307 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 H2AFZP0C0S5 128 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 MUTP22033 750 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 GUCY2CP25092 1073 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 ZNF772Q68DY9 489 aaPredicted RBP23.32■■□□□ 1.32
CCDC38-201ENST00000344280 LEKR1Q6ZMV7 388 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 H2AFVQ71UI9 128 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 IFT20Q8IY31 132 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 SLC30A5Q8TAD4 765 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 CASKIN2Q8WXE0 1202 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 TAF4BQ92750 862 aa23.32■■□□□ 1.32
CCDC38-201ENST00000344280 DHX15O43143 795 aaKnown RBP23.31■■□□□ 1.32
CCDC38-201ENST00000344280 LRRN2O75325 713 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 ICAM1P05362 532 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 FERP16591 822 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 ITGB3BPQ13352 177 aaPredicted RBP23.31■■□□□ 1.32
CCDC38-201ENST00000344280 PADI6Q6TGC4 694 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 PROCA1Q8NCQ7 364 aaPredicted RBP23.31■■□□□ 1.32
CCDC38-201ENST00000344280 CLEC4DQ8WXI8 215 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 HOOK2Q96ED9 719 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 PSMD1Q99460 953 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 STK33Q9BYT3 514 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 KCND2Q9NZV8 630 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 TMEM150BA6NC51 233 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 CEP104O60308 925 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 GALCP54803 685 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 DLG4P78352 724 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 LRRC31Q6UY01 552 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 MIER3Q7Z3K6 550 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 VPS36Q86VN1 386 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 SYCP3Q8IZU3 236 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 CPXCR1Q8N123 301 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 METTL13Q8N6R0 699 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 RIT2Q99578 217 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 INTS2Q9H0H0 1204 aaKnown RBP23.31■■□□□ 1.32
CCDC38-201ENST00000344280 PCIF1Q9H4Z3 704 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 OSGEPQ9NPF4 335 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 HOMER2Q9NSB8 354 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 ZHX2Q9Y6X8 837 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 UBE4BO95155 1302 aa23.31■■□□□ 1.32
CCDC38-201ENST00000344280 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 K7ENM7 598 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 EXOC3O60645 756 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 TRMT1LQ7Z2T5 733 aaKnown RBP23.3■■□□□ 1.32
CCDC38-201ENST00000344280 RTKN2Q8IZC4 609 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 GOLGA6L1Q8N7Z2 621 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 SH3GL2Q99962 352 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 GOLGA6CA6NDK9 693 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 WNT10BO00744 389 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 GOLGA6DP0CG33 693 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 KCNA3P22001 575 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 SPP2Q13103 211 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 PHLDB3Q6NSJ2 640 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 PALB2Q86YC2 1186 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 ZSWIM2Q8NEG5 633 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 AP1M1Q9BXS5 423 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 DEFB129Q9H1M3 183 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 GOLGA6AQ9NYA3 693 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 RPTORQ8N122 1335 aa23.3■■□□□ 1.32
CCDC38-201ENST00000344280 IGSF9BQ9UPX0 1349 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 ANXA13P27216 316 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 GUCY2FP51841 1108 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 MRPS9P82933 396 aaKnown RBP23.29■■□□□ 1.32
CCDC38-201ENST00000344280 BFSP1Q12934 665 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 FKBP1CQ5VVH2 108 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 SLFN11Q7Z7L1 901 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 ARL8AQ96BM9 186 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 SYT11Q9BT88 431 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 ASNSP08243 561 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 IFI16Q16666 785 aaKnown RBP23.29■■□□□ 1.32
CCDC38-201ENST00000344280 ARHGAP44Q17R89 818 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 STXBP4Q6ZWJ1 553 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 PEX26Q7Z412 305 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 DAAM2Q86T65 1068 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 FAM83AQ86UY5 434 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 ZIM3Q96PE6 472 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 TAS2R14Q9NYV8 317 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 APEX2Q9UBZ4 518 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 STXBP5LQ9Y2K9 1186 aa23.29■■□□□ 1.32
CCDC38-201ENST00000344280 MYL7Q01449 175 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 TBC1D10BQ4KMP7 808 aaPredicted RBP23.28■■□□□ 1.32
CCDC38-201ENST00000344280 TTMPQ5BVD1 217 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 LMO3Q8TAP4 145 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 FAM76AQ8TAV0 307 aa23.28■■□□□ 1.32
CCDC38-201ENST00000344280 SCFD2Q8WU76 684 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms