RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 BNIP1Q12981 228 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 ALG3Q92685 438 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
CLCN1-201ENST00000343257 IRAK4Q9NWZ3 460 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 BHMG1C9JSJ3 638 aaPredicted RBP16.07■□□□□ 0.16
CLCN1-201ENST00000343257 GNA11P29992 359 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 COBLL1Q53SF7 1204 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 PROM2Q8N271 834 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 DAGLBQ8NCG7 672 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 TAS2R14Q9NYV8 317 aa16.07■□□□□ 0.16
CLCN1-201ENST00000343257 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLCN1-201ENST00000343257 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 AGTP01019 485 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 ALADP13716 330 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 ATF3P18847 181 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 CASP4P49662 377 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 EIF6P56537 245 aaKnown RBP16.06■□□□□ 0.16
CLCN1-201ENST00000343257 PTENP60484 403 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 VPS36Q86VN1 386 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 HES6Q96HZ4 224 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 IFT74Q96LB3 600 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 CRAMP1Q96RY5 1269 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 ARMCX3Q9UH62 379 aaPredicted RBP16.06■□□□□ 0.16
CLCN1-201ENST00000343257 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 POTECB2RU33 542 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 TARSP26639 723 aaKnown RBP16.06■□□□□ 0.16
CLCN1-201ENST00000343257 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 LNX1Q8TBB1 728 aaPredicted RBP16.06■□□□□ 0.16
CLCN1-201ENST00000343257 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 MEIS1O00470 390 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 NUDT17P0C025 328 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 SYCE1Q8N0S2 351 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 KRT35Q92764 455 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
CLCN1-201ENST00000343257 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 STAT3P40763 770 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 MGAT5Q09328 741 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 TRIP13Q15645 432 aaPredicted RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 ARHGAP44Q17R89 818 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 ANO7Q6IWH7 933 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 CCDC105Q8IYK2 499 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 HAO1Q9UJM8 370 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 RIPK2O43353 540 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 NEFHP12036 1026 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 MPP2Q14168 576 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 TTC27Q6P3X3 843 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 PALB2Q86YC2 1186 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 CPNE8Q86YQ8 564 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 TGFBRAP1Q8WUH2 860 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 SEC14L1Q92503 715 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 PWWP2AQ96N64 755 aa16.05■□□□□ 0.16
CLCN1-201ENST00000343257 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
CLCN1-201ENST00000343257 KLHL33A6NCF5 533 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 PECAM1P16284 738 aaPredicted RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 STX2P32856 288 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 VPS41P49754 854 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 MAPK7Q13164 816 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 PSMD2Q13200 908 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 GALNTL6Q49A17 601 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 GALNT17Q6IS24 598 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 TAOK1Q7L7X3 1001 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 UTP4Q969X6 686 aaKnown RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 THAP2Q9H0W7 228 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 HOMER3Q9NSC5 361 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 ARL2BPQ9Y2Y0 163 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 C1orf167Q5SNV9 1468 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
CLCN1-201ENST00000343257 POLE2P56282 527 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 DIXDC1Q155Q3 683 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 SPIRE2Q8WWL2 714 aa16.04■□□□□ 0.16
CLCN1-201ENST00000343257 CTNNBL1Q8WYA6 563 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms