RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 ROPN1BQ9BZX4 212 aaPredicted RBP10.46□□□□□ -0.73
HOXA1-201ENST00000343060 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 RIOX1Q9H6W3 641 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 ROPN1Q9HAT0 212 aaPredicted RBP10.46□□□□□ -0.73
HOXA1-201ENST00000343060 RXFP1Q9HBX9 757 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
HOXA1-201ENST00000343060 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 PCYOX1Q9UHG3 505 aa10.46□□□□□ -0.73
HOXA1-201ENST00000343060 ARFGEF1Q9Y6D6 1849 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 TAF1P21675 1872 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 RIPK2O43353 540 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 VCAM1P19320 739 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 NR2F2P24468 414 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 ABL2P42684 1182 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 MSH2P43246 934 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 HADHBP55084 474 aaKnown RBP10.46□□□□□ -0.74
HOXA1-201ENST00000343060 CCDC15Q0P6D6 951 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 SPICE1Q8N0Z3 855 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.74
HOXA1-201ENST00000343060 PRCCQ92733 491 aaPredicted RBP10.46□□□□□ -0.74
HOXA1-201ENST00000343060 HAS1Q92839 578 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 SEMA4AQ9H3S1 761 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 MKNK2Q9HBH9 465 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.74
HOXA1-201ENST00000343060 PPP1R9AQ9ULJ8 1098 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 ARL2BPQ9Y2Y0 163 aa10.46□□□□□ -0.74
HOXA1-201ENST00000343060 EME2A4GXA9 379 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 ABLIM1O14639 778 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SLC16A3O15427 465 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 RARGP13631 454 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 ATP2A2P16615 1042 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 CYP11B2P19099 503 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 CHRNA3P32297 505 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 ADCY7P51828 1080 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 PLTPP55058 493 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 UBAP2Q5T6F2 1119 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 EPM2AIP1Q7L775 607 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 TEX9Q8N6V9 391 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 U2AF1L4Q8WU68 220 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 GLG1Q92896 1179 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 PIGSQ96S52 555 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 MTRF1LQ9UGC7 380 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SNX24Q9Y343 169 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 IGSF9BQ9UPX0 1349 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 CDK5RAP2Q96SN8 1893 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 TLDC2A0PJX2 215 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 A8MUI8 341 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 PODXLO00592 558 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 RASGRF2O14827 1237 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 FESP07332 822 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 LINGO3P0C6S8 592 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 PLA2G4BP0C869 781 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 LMNB1P20700 586 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 CTNNA2P26232 953 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 KLRK1P26718 216 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 RPL21P46778 160 aaKnown RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 LACTBP83111 547 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 KCTD19Q17RG1 926 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 RNF43Q68DV7 783 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 EXOC3L1Q86VI1 746 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 ZNF444Q8N0Y2 327 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SLC35G2Q8TBE7 412 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 RUNDC3BQ96NL0 473 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 OSGEPQ9NPF4 335 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SPATA31A1Q5TZJ5 1347 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
HOXA1-201ENST00000343060 DOT1LQ8TEK3 1739 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 E7ENQ6 273 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 AHCYL1O43865 530 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 PDE6BP35913 854 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 IFNAR2P48551 515 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 CLK2P49760 499 aaKnown RBP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 TCEAL1Q15170 157 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 CYP1B1Q16678 543 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 VSTM1Q6UX27 236 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 SPATA21Q7Z572 469 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 CKAP2Q8WWK9 683 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ALG3Q92685 438 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 FGFR1OP2Q9NVK5 253 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ZFATQ9P243 1243 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 GGPS1O95749 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms