RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 LRCH2Q5VUJ6 765 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 TDRD3Q9H7E2 651 aaKnown RBP26.11■■□□□ 1.77
NELFB-201ENST00000343053 STXBP5LQ9Y2K9 1186 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 LRRC37AA6NMS7 1700 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 BMP3P12645 472 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 SOX5P35711 763 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 FMO5P49326 533 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 DHX9Q08211 1270 aaKnown RBP26.11■■□□□ 1.77
NELFB-201ENST00000343053 ZYXQ15942 572 aaKnown RBP26.11■■□□□ 1.77
NELFB-201ENST00000343053 OTUD6BQ8N6M0 293 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 THAP2Q9H0W7 228 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 ERVK-5Q9HDB9 667 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 AMFRQ9UKV5 643 aa26.11■■□□□ 1.77
NELFB-201ENST00000343053 LTBP4Q8N2S1 1624 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 TMEM110-MUSTN1A8MSY1 372 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 TBX3O15119 743 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 SLITRK3O94933 977 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 FERP16591 822 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 PSMC2P35998 433 aaKnown RBP26.1■■□□□ 1.77
NELFB-201ENST00000343053 BORCS6Q96GS4 357 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 NOVA2Q9UNW9 492 aaKnown RBP26.1■■□□□ 1.77
NELFB-201ENST00000343053 ATP8A1Q9Y2Q0 1164 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 UBAP1LF5GYI3 381 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 SLC16A3O15427 465 aaKnown RBP26.1■■□□□ 1.77
NELFB-201ENST00000343053 BMT2Q1RMZ1 405 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 GLG1Q92896 1179 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 ZNF622Q969S3 477 aaKnown RBP eCLIP26.1■■□□□ 1.772e-6■■□□□ 14.2
NELFB-201ENST00000343053 SH2D3AQ9BRG2 576 aa26.1■■□□□ 1.77
NELFB-201ENST00000343053 SUCLA2Q9P2R7 463 aaPredicted RBP26.1■■□□□ 1.77
NELFB-201ENST00000343053 TOM1O60784 492 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 IFT88Q13099 833 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 QSER1Q2KHR3 1735 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 GOPCQ9HD26 462 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 CNOT8Q9UFF9 292 aaKnown RBP26.09■■□□□ 1.77
NELFB-201ENST00000343053 PRR12Q9ULL5 1215 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 IGLV3-22A0A075B6J6 115 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 CES2O00748 559 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 KIAA1755Q5JYT7 1200 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 TMEM179Q6ZVK1 233 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 SLFN11Q7Z7L1 901 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 SEPT12Q8IYM1 358 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 HES6Q96HZ4 224 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 ZDHHC15Q96MV8 337 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 PCIF1Q9H4Z3 704 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 EFCC1Q9HA90 598 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 THSD7AQ9UPZ6 1657 aa26.09■■□□□ 1.77
NELFB-201ENST00000343053 ANKRD31Q8N7Z5 1873 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 H0YHG0 523 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 MKRN4PQ13434 485 aaPredicted RBP26.08■■□□□ 1.77
NELFB-201ENST00000343053 ZNF746Q6NUN9 644 aaPredicted RBP26.08■■□□□ 1.77
NELFB-201ENST00000343053 FAM178BQ8IXR5 827 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 SLC20A1Q8WUM9 679 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 CTNNBL1Q8WYA6 563 aaPredicted RBP26.08■■□□□ 1.77
NELFB-201ENST00000343053 LRRC45Q96CN5 670 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 HOOK2Q96ED9 719 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 PARVGQ9HBI0 331 aa26.08■■□□□ 1.77
NELFB-201ENST00000343053 SMIM23A6NLE4 172 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 CPP00450 1065 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 LLGL1Q15334 1064 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 KRT71Q3SY84 523 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 ODR4Q5SWX8 454 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 ICE2Q659A1 982 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 B4GALNT4Q76KP1 1039 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 TMC3Q7Z5M5 1100 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 LMBR1Q8WVP7 490 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 CALR3Q96L12 384 aaKnown RBP26.08■■□□□ 1.76
NELFB-201ENST00000343053 GPR88Q9GZN0 384 aa26.08■■□□□ 1.76
NELFB-201ENST00000343053 TRIM37O94972 964 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 CHADLQ6NUI6 762 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 C1orf186Q6ZWK4 172 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 GJD4Q96KN9 370 aaPredicted RBP26.07■■□□□ 1.76
NELFB-201ENST00000343053 INTS2Q9H0H0 1204 aaKnown RBP26.07■■□□□ 1.76
NELFB-201ENST00000343053 OLFML3Q9NRN5 406 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 COG5Q9UP83 839 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 C10orf71Q711Q0 1435 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 PPP1R12BO60237 982 aaPredicted RBP26.07■■□□□ 1.76
NELFB-201ENST00000343053 DLG4P78352 724 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 OTOP1Q7RTM1 612 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 HSD17B14Q9BPX1 270 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 POLR3CQ9BUI4 534 aaPredicted RBP26.07■■□□□ 1.76
NELFB-201ENST00000343053 SCN9AQ15858 1988 aa26.07■■□□□ 1.76
NELFB-201ENST00000343053 MEFVO15553 781 aaPredicted RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 FOSP01100 380 aaPredicted RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 MAGOHP61326 146 aaKnown RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 QPCTQ16769 361 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 MSL1Q68DK7 614 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 SYCE1Q8N0S2 351 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 RASGEF1CQ8N431 466 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 SLC30A5Q8TAD4 765 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 MAGOHBQ96A72 148 aaKnown RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 UTP11Q9Y3A2 253 aaKnown RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 MYH11P35749 1972 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 MARCKSL1P49006 195 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 MYL7Q01449 175 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 KCNV1Q6PIU1 500 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 UHMK1Q8TAS1 419 aaKnown RBP26.06■■□□□ 1.76
NELFB-201ENST00000343053 RFFLQ8WZ73 363 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 AGPAT3Q9NRZ7 376 aa26.06■■□□□ 1.76
NELFB-201ENST00000343053 KLRG2A4D1S0 409 aaPredicted RBP26.05■■□□□ 1.76
NELFB-201ENST00000343053 CCDC188H7C350 402 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms