RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
SNX18-202ENST00000343017 NSRP1Q9H0G5 558 aaKnown RBP16.49■□□□□ 0.23
SNX18-202ENST00000343017 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 ETAA1Q9NY74 926 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
SNX18-202ENST00000343017 CTNNAL1Q9UBT7 734 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 SLIT2O94813 1529 aa16.49■□□□□ 0.23
SNX18-202ENST00000343017 ANKRD63C9JTQ0 380 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 SNUPNO95149 360 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 CASP5P51878 434 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 MGAT5Q09328 741 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 TNIP1Q15025 636 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 C6orf118Q5T5N4 469 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 ARMC3Q5W041 872 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 UTP4Q969X6 686 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 COA7Q96BR5 231 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 BCAS3Q9H6U6 928 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 GRHL1Q9NZI5 618 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 FLOT1O75955 427 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 TSPY3P0CV98 308 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 TSPY8P0CW00 308 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 NR2F2P24468 414 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 CCDC152Q4G0S7 254 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 DDX23Q9BUQ8 820 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 EP400Q96L91 3159 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 TMEM120BA0PK00 339 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 SUN1O94901 812 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 AGTP01019 485 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 ATP11AP98196 1134 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 MPP2Q14168 576 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 PLS1Q14651 629 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 SPTY2D1Q68D10 685 aaPredicted RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 ANO7Q6IWH7 933 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 ANKLE1Q8NAG6 615 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 ETNK1Q9HBU6 452 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 EMILIN3Q9NT22 766 aa16.48■□□□□ 0.23
SNX18-202ENST00000343017 CPSF2Q9P2I0 782 aaKnown RBP16.48■□□□□ 0.23
SNX18-202ENST00000343017 H0Y3Z8 333 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 GNAT1P11488 350 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 EXOC3L4Q17RC7 722 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 ZDHHC14Q8IZN3 488 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 REXO1Q8N1G1 1221 aaKnown RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 COL4A1P02462 1669 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 SMIM24O75264 130 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 ACSL3O95573 720 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 MARCKSL1P49006 195 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 GNAQP50148 359 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 PSMD2Q13200 908 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 MEX3CQ5U5Q3 659 aaKnown RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 LNX1Q8TBB1 728 aaPredicted RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 POP1Q99575 1024 aaKnown RBP16.47■□□□□ 0.23
SNX18-202ENST00000343017 IKZF4Q9H2S9 585 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 KCTD10Q9H3F6 313 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 CACNA1SQ13698 1873 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
SNX18-202ENST00000343017 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 TMEM110-MUSTN1A8MSY1 372 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 PECAM1P16284 738 aaPredicted RBP16.46■□□□□ 0.23
SNX18-202ENST00000343017 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
SNX18-202ENST00000343017 KCNJ1P48048 391 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 TMEM266Q2M3C6 531 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 TTC27Q6P3X3 843 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 ASRGL1Q7L266 308 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 SPATA21Q7Z572 469 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 CEP63Q96MT8 703 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
SNX18-202ENST00000343017 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 ABCA3Q99758 1704 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 CASZ1Q86V15 1759 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 ANKRD33BA6NCL7 494 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 RIPK2O43353 540 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 PCK1P35558 622 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 RBBP5Q15291 538 aaKnown RBP16.46■□□□□ 0.23
SNX18-202ENST00000343017 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 CCDC134Q9H6E4 229 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 HOMER3Q9NSC5 361 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
SNX18-202ENST00000343017 TAS2R14Q9NYV8 317 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 NHSL1Q5SYE7 1610 aa16.46■□□□□ 0.23
SNX18-202ENST00000343017 RAB27AP51159 221 aa16.45■□□□□ 0.22
SNX18-202ENST00000343017 ZNF131P52739 623 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms