RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 TRIM7Q9C029 511 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 PCMTD2Q9NV79 361 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 A0A0A6YYK5 440 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 IRS4O14654 1257 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 RASGRF2O14827 1237 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 DDX3YO15523 660 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 BAG3O95817 575 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 PCP11498 1178 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 ACADSP16219 412 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 NPEPPSP55786 919 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 MARSP56192 900 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 RNASELQ05823 741 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 KLC1Q07866 573 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 PDIA5Q14554 519 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 SLC35G1Q2M3R5 365 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 VSTM1Q6UX27 236 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 TAOK1Q7L7X3 1001 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 ECHDC2Q86YB7 292 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 PHC3Q8NDX5 983 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 MGARPQ8TDB4 240 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 ASAP3Q8TDY4 903 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 CKAP2Q8WWK9 683 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 FAM136AQ96C01 138 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 CALML4Q96GE6 196 aa10.17□□□□□ -0.78
NECAP1-201ENST00000339754 STMN4Q9H169 189 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 COL14A1Q05707 1796 aaKnown RBP10.17□□□□□ -0.78
NECAP1-201ENST00000339754 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 RIPK2O43353 540 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 ACTN1P12814 892 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 RFC5P40937 340 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 PTGIRP43119 386 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 DYNLL1P63167 89 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 CCDC15Q0P6D6 951 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 BARGINQ6ZT62 677 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 ARHGAP22Q7Z5H3 698 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 JAMLQ86YT9 394 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 FAM13CQ8NE31 585 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 BRIP1Q9BX63 1249 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 CCDC113Q9H0I3 377 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 BZW2Q9Y6E2 419 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 RPS6KL1Q9Y6S9 549 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 MYH3P11055 1940 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 TMEM120BA0PK00 339 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 CCNT1O60563 726 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 MPP2Q14168 576 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 PPP2R5EQ16537 467 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 FOXB2Q5VYV0 432 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 GALNT17Q6IS24 598 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 ADAT2Q7Z6V5 191 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 MYOCDQ8IZQ8 938 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 SYCE1Q8N0S2 351 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 DYDC1Q8WWB3 177 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 LARP4BQ92615 738 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 RBM41Q96IZ5 413 aaKnown RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 CEP63Q96MT8 703 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 LRMDAQ9H2I8 198 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 DLGAP2Q9P1A6 1054 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 CTNNAL1Q9UBT7 734 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 AMFRQ9UKV5 643 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 PPP1R9AQ9ULJ8 1098 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 PCDHA3Q9Y5H8 950 aa10.16□□□□□ -0.78
NECAP1-201ENST00000339754 COL16A1Q07092 1604 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 AHDC1Q5TGY3 1603 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-201ENST00000339754 ATP8B3O60423 1300 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 USP17L12C9JPN9 530 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 USP17L21D6R901 530 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 HGSO14964 777 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-201ENST00000339754 H2AFZP0C0S5 128 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 FGFR4P22455 802 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 PTDSS1P48651 473 aaKnown RBP10.15□□□□□ -0.78
NECAP1-201ENST00000339754 DHX34Q14147 1143 aaKnown RBP10.15□□□□□ -0.78
NECAP1-201ENST00000339754 LETM2Q2VYF4 491 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 H2AFVQ71UI9 128 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
NECAP1-201ENST00000339754 DDX12PQ92771 950 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 KIFAP3Q92845 792 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 BICD1Q96G01 975 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 NUDCD1Q96RS6 583 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 STK17AQ9UEE5 414 aa10.15□□□□□ -0.78
NECAP1-201ENST00000339754 SLC9A1P19634 815 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 HOXA7P31268 230 aaPredicted RBP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 PRKCIP41743 596 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 RPL21P46778 160 aaKnown RBP10.15□□□□□ -0.79
NECAP1-201ENST00000339754 LMNB2Q03252 620 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 MAPK7Q13164 816 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 CUL3Q13618 768 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 ACVR2BQ13705 512 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 ZNF568Q3ZCX4 644 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 SOGA3Q5TF21 947 aa10.15□□□□□ -0.79
NECAP1-201ENST00000339754 KIF6Q6ZMV9 814 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms