RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 ATG16L1Q676U5 607 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 FAF2Q96CS3 445 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 MRFAP1Q9Y605 127 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 H0Y3Z8 333 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 ATP1A1P05023 1023 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 CHGBP05060 677 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 ESRRGP62508 458 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 COG1Q8WTW3 980 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 CHP1Q99653 195 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
OTOF-203ENST00000339598 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
OTOF-203ENST00000339598 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 COPEO14579 308 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 TADA3O75528 432 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 JAK3P52333 1124 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 FOXO4P98177 505 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 MAPK6Q16659 721 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 GMNCA6NCL1 334 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 S100BP04271 92 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 BRAFP15056 766 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 VSNL1P62760 191 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 CIAPIN1Q6FI81 312 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 DEPDC1BQ8WUY9 529 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 FGD4Q96M96 766 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 CYTH2Q99418 400 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 KIAA1586Q9HCI6 787 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 SLC12A6Q9UHW9 1150 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 GNGT2O14610 69 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 ANKRD20A4Q4UJ75 823 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 NAALADL2Q58DX5 795 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 ANKRD20A2Q5SQ80 823 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 ANKRD20A1Q5TYW2 823 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 MMS22LQ6ZRQ5 1243 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 CRLF3Q8IUI8 442 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 RYBPQ8N488 228 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 FAM84BQ96KN1 310 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
OTOF-203ENST00000339598 KLC2Q9H0B6 622 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 HEY1Q9Y5J3 304 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 CHUKO15111 745 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 MAP3K7O43318 606 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 STAT3P40763 770 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 VAMP7P51809 220 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 ORC2Q13416 577 aaPredicted RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 ANKRD40Q6AI12 368 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 KRT80Q6KB66 452 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 BZW1Q7L1Q6 419 aaKnown RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 ATG9AQ7Z3C6 839 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
OTOF-203ENST00000339598 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
OTOF-203ENST00000339598 GOLGA8MH3BSY2 632 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 DCTN3O75935 186 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 OSBPP22059 807 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 CATSPER4Q7RTX7 472 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 ZNF564Q8TBZ8 553 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 N4BP2L2Q92802 583 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 VPS39Q96JC1 886 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 TRIM9Q9C026 710 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 CAPN11Q9UMQ6 739 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 MORC2Q9Y6X9 1032 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 GYG2O15488 501 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 KRT38O76015 456 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 PMS2P54278 862 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 OCRLQ01968 901 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 EDEM3Q9BZQ6 932 aa13.35□□□□□ -0.27
OTOF-203ENST00000339598 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 NOP53Q9NZM5 478 aaKnown RBP13.35□□□□□ -0.27
OTOF-203ENST00000339598 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms