RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 ALS2CLQ60I27 953 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 TMEM270Q6UE05 265 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 RAB3IL1Q8TBN0 382 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 FTLP02792 175 aaPredicted RBP17.26■□□□□ 0.35
CCNY-202ENST00000339497 ACTN1P12814 892 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 GPC5P78333 572 aa17.26■□□□□ 0.35
CCNY-202ENST00000339497 ZNF185O15231 689 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RSRC1Q96IZ7 334 aaKnown RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 C11orf70Q9BRQ4 267 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RPF1Q9H9Y2 349 aaKnown RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 PDXKO00764 312 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 ACSL3O95573 720 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 KLK7P49862 253 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RASGRP2Q7LDG7 609 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RPS6KC1Q96S38 1066 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 ABCD1P33897 745 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 VSNL1P62760 191 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 CD2APQ9Y5K6 639 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 PCK1P35558 622 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 MAPK6Q16659 721 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
CCNY-202ENST00000339497 HEXIM2Q96MH2 286 aaKnown RBP17.25■□□□□ 0.35
CCNY-202ENST00000339497 CCDC160A6NGH7 325 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 ANKRD65E5RJM6 399 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 RASGRF2O14827 1237 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SFNP31947 248 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SLC12A2P55011 1212 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 RBM43Q6ZSC3 357 aaKnown RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 NSMCE1Q8WV22 266 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SLC10A4Q96EP9 437 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 RIMS1Q86UR5 1692 aaKnown RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 PALM3A6NDB9 673 aaPredicted RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 WTIPA6NIX2 430 aaPredicted RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 MTMR2Q13614 643 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SPATA4Q8NEY3 305 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 MYOM1P52179 1685 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 ENTPD3O75355 529 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 CUL1Q13616 776 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 TACO1Q9BSH4 297 aaKnown RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 TFR2Q9UP52 801 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 PLAAQ9Y263 795 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 PCDHA10Q9Y5I2 948 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SLC37A4O43826 429 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 LDHAP00338 332 aaKnown RBP17.24■□□□□ 0.35
CCNY-202ENST00000339497 INHBAP08476 426 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 GYS1P13807 737 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 SAT1P21673 171 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 GGCXP38435 758 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 PDCLQ13371 301 aa17.24■□□□□ 0.35
CCNY-202ENST00000339497 MIF4GDA9UHW6 222 aaKnown RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.354e-6■■■■□ 25.8
CCNY-202ENST00000339497 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 TMED2Q15363 201 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 GLE1Q53GS7 698 aaKnown RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 LMBRD2Q68DH5 695 aaPredicted RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 KRT39Q6A163 491 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 LRRC8CQ8TDW0 803 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 CLTAP09496 248 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 EXOC8Q8IYI6 725 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 KCTD6Q8NC69 237 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 FBXO40Q9UH90 709 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 MCF2LO15068 1137 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 XPOTO43592 962 aaKnown RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 MYBP10242 640 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 SLMAPQ14BN4 828 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 CDO1Q16878 200 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 CCNYQ8ND76 341 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 GABPB2Q8TAK5 448 aaPredicted RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 ZWILCHQ9H900 591 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 NGRNQ9NPE2 291 aaKnown RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
CCNY-202ENST00000339497 ODF2LQ9ULJ1 636 aa17.23■□□□□ 0.35
CCNY-202ENST00000339497 MED7O43513 233 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 CRCPO75575 148 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 BAATQ14032 418 aaPredicted RBP17.22■□□□□ 0.35
CCNY-202ENST00000339497 ZC2HC1CQ53FD0 456 aaPredicted RBP17.22■□□□□ 0.35
CCNY-202ENST00000339497 PRAMEF18Q5VWM3 479 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 SLC9A1P19634 815 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 BBS9Q3SYG4 887 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 SNX25Q9H3E2 840 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 SPATA31A6Q5VVP1 1343 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms