RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CCHCR1Q8TD31 782 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PRR23AA6NEV1 266 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 GNAT1P11488 350 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PRAMEP78395 509 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PKP1Q13835 747 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CC2D1AQ6P1N0 951 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 SYT2Q8N9I0 419 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CENPKQ9BS16 269 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 KIFC3Q9BVG8 833 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 AOX1Q06278 1338 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PFKFB2O60825 505 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 IMPDH2P12268 514 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 EAF2Q96CJ1 260 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 ATP10BO94823 1461 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 UBXN8O00124 270 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 TBC1D1Q86TI0 1168 aaPredicted RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 SPATS2Q86XZ4 545 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 SEMA3EO15041 775 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 IL13P35225 146 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 BZW1Q7L1Q6 419 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 FAM213AQ9BRX8 229 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 RGL1Q9NZL6 768 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 LRRC8EQ6NSJ5 796 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 PALMDQ9NP74 551 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 KCNA2P16389 499 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 EPHB4P54760 987 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ABCB11O95342 1321 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 SERPING1P05155 500 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 GRIK1P39086 918 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 TMEM270Q6UE05 265 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ZFYVE9O95405 1425 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 FASTKD1Q53R41 847 aaKnown RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ST13P4Q8IZP2 240 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ARL8AQ96BM9 186 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 OSBPL10Q9BXB5 764 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 PITPNM3Q9BZ71 974 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ATP9BO43861 1147 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 MYO1DO94832 1006 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF445P59923 1031 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 PAWRQ96IZ0 340 aaKnown RBP12.55□□□□□ -0.4
SHANK2-201ENST00000338508 NFU1Q9UMS0 254 aa12.55□□□□□ -0.4
SHANK2-201ENST00000338508 LMNAP02545 664 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 SKIP12755 728 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 GPC3P51654 580 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 SPATS2LQ9NUQ6 558 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 LRRC53A6NM62 1247 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 RSPH10B2B2RC85 870 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 RSPH10BP0C881 870 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 BTBD6Q96KE9 485 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 M0QYV0 167 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PDCLQ13371 301 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 MTMR1Q13613 665 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 C1orf131Q8NDD1 294 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 SUPT3HO75486 399 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 FGGP02679 453 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 EPB42P16452 691 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PWP1Q13610 501 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 DCUN1D1Q96GG9 259 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 GEMIN8Q9NWZ8 242 aaKnown RBP12.54□□□□□ -0.4
SHANK2-201ENST00000338508 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 UBE4BO95155 1302 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 CIAPIN1Q6FI81 312 aa12.54□□□□□ -0.4
SHANK2-201ENST00000338508 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms