RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FBXO25Q8TCJ0 367 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 SREK1Q8WXA9 508 aaKnown RBP14.21□□□□□ -0.13
COL2A1-201ENST00000337299 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 DYNLL2Q96FJ2 89 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 CYP4F11Q9HBI6 524 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 MROH5Q6ZUA9 1318 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 GSG1L2A8MUP6 293 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 DLATP10515 647 aaKnown RBP14.21□□□□□ -0.13
COL2A1-201ENST00000337299 PGM1P36871 562 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 KDSRQ06136 332 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 NAB2Q15742 525 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 KLHDC7AQ5VTJ3 777 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 ARHGAP22Q7Z5H3 698 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 JAMLQ86YT9 394 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 AGGF1Q8N302 714 aaeCLIP14.21□□□□□ -0.13
COL2A1-201ENST00000337299 PIGOQ8TEQ8 1089 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 UBXN6Q9BZV1 441 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 ANKRD2Q9GZV1 360 aa14.21□□□□□ -0.13
COL2A1-201ENST00000337299 WDR19Q8NEZ3 1342 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 ARHGEF35A5YM69 484 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 CAPN9O14815 690 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 HSPA6P17066 643 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 MAPK4P31152 587 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 CHRNDQ07001 517 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 KCNMA1Q12791 1236 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 BFSP1Q12934 665 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.14
COL2A1-201ENST00000337299 LIN9Q5TKA1 542 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 USP37Q86T82 979 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 SLC26A7Q8TE54 656 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 SH3GL2Q99962 352 aa14.21□□□□□ -0.14
COL2A1-201ENST00000337299 UBE2TQ9NPD8 197 aaPredicted RBP14.21□□□□□ -0.14
COL2A1-201ENST00000337299 RFX7Q2KHR2 1363 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 LAD1O00515 517 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 MT-ND3P03897 115 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 INHBAP08476 426 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 CYP2D6P10635 497 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 PHBP35232 272 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 BBS9Q3SYG4 887 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 RABGAP1LQ5R372 815 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 GIMAP8Q8ND71 665 aaPredicted RBP14.2□□□□□ -0.14
COL2A1-201ENST00000337299 PIGSQ96S52 555 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 EYA3Q99504 573 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 PCIF1Q9H4Z3 704 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 STK17AQ9UEE5 414 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
COL2A1-201ENST00000337299 DNAJC12Q9UKB3 198 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 TRIM33Q9UPN9 1127 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 SGK1O00141 431 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 ARFIP2P53365 341 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 EGFL6Q8IUX8 553 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 FAM178BQ8IXR5 827 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 CFAP57Q96MR6 1250 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 OSBPL7Q9BZF2 842 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 SALL1Q9NSC2 1324 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 E9PMD0 336 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 RNF8O76064 485 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 HLA-DOAP06340 250 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 ATP4AP20648 1035 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 MAN1A1P33908 653 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
COL2A1-201ENST00000337299 DYNLT1P63172 113 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 MYL7Q01449 175 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 CXorf38Q8TB03 319 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 ERP44Q9BS26 406 aa14.2□□□□□ -0.14
COL2A1-201ENST00000337299 XAB2Q9HCS7 855 aaKnown RBP14.2□□□□□ -0.14
COL2A1-201ENST00000337299 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
COL2A1-201ENST00000337299 CFLARO15519 480 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RHOBTB3O94955 611 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 APBA3O96018 575 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 GALCP54803 685 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 GSTO1P78417 241 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 TRIM59Q8IWR1 403 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 SRBD1Q8N5C6 995 aaKnown RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RSAD2Q8WXG1 361 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 TATDN2Q93075 761 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RPS6KC1Q96S38 1066 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 SHOX2O60902 331 aaPredicted RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 SUPT3HO75486 399 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 SLC9A1P19634 815 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 PTK2Q05397 1052 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 UBE2SQ16763 222 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 FAM118BQ9BPY3 351 aa14.19□□□□□ -0.14
COL2A1-201ENST00000337299 MAK16Q9BXY0 300 aaKnown RBP14.19□□□□□ -0.14
COL2A1-201ENST00000337299 USP40Q9NVE5 1235 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms